Rubrobacter xylanophilus: Rxyl_1456
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Entry
Rxyl_1456 CDS
T00368
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00900
Terpenoid backbone biosynthesis
rxy01100
Metabolic pathways
rxy01110
Biosynthesis of secondary metabolites
Module
rxy_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Rxyl_1456
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rxy01006
]
Rxyl_1456
Enzymes [BR:
rxy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Rxyl_1456
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Rxyl_1456
2.5.1.29 geranylgeranyl diphosphate synthase
Rxyl_1456
Prenyltransferases [BR:
rxy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Rxyl_1456
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ABG04418
UniProt:
Q1AW10
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All DBs
Position
complement(1477863..1478762)
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AA seq
299 aa
AA seq
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MENLASAGRWERHRRIFEEYLEGLRFTEEPALERLQEAMRYSLLAGGKRVRPLLCMESAR
LFGAPPERVLPSAAAIELIHTYSLIHDDLPAMDNDDFRRGRPTSHKKFGEAMAILAGDAF
FGEALTLITVRQEGTCEQRLGVVQELASSTGVNGMVGGQVLDMDQTGAGGSADPGMLFMI
HRYKTGALIRSSARVGAILAGAGEEGLEAISRYATELGLCFQIVDDVLDAVGSSERLGKR
AGGDAERGKATFVSVFGLEGARREADAACERALRALGRLEGRDTSALGELALFVRHRGS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctggctagcgccgggcgctgggagcggcaccggaggatcttcgaggagtac
ctggaggggctgcgcttcaccgaagagcccgccctcgagcggctgcaggaggcgatgcgc
tactcgctgcttgccgggggaaagcgcgtgaggcccctcctctgcatggagagcgcccgc
ctcttcggcgctcccccggagagggtgctcccctccgccgccgccatagagctgatccac
acctactccctcatccacgacgaccttcccgcgatggacaacgacgacttccgcaggggc
aggcccaccagccacaagaagttcggggaggcgatggccatcctggcgggcgacgccttc
ttcggggaggcgctcacgctcatcaccgtcaggcaggagggcacctgcgagcagcggctc
ggggtggtgcaggagctcgcgagctccaccggcgtcaacggcatggtcggcgggcaggtg
ctcgacatggaccagaccggggcgggcgggagcgccgaccccgggatgctgttcatgatc
caccgctacaagaccggcgcgctcataaggtccagcgcgcgggtgggcgccatcctggcc
ggggcgggcgaggaggggctcgaggccatctcgcggtacgccacggagcttgggctgtgc
ttccagatagtggatgacgtgctggacgcggtgggcagcagcgagcggctgggcaagcgg
gccgggggggacgccgagcggggcaaggccacgtttgtgagcgtgtttgggctcgagggg
gccaggagggaggccgacgccgcctgcgagcgggcgctgcgggcgctcgggcgcctggaa
ggccgggacacctccgccctcggggagctcgcgctcttcgtccgccaccgggggagctag
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