Rubrobacter xylanophilus: Rxyl_1504
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Entry
Rxyl_1504 CDS
T00368
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rxyl_1504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_1504
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rxyl_1504
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rxyl_1504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABG04466
UniProt:
Q1AVW2
LinkDB
All DBs
Position
complement(1524142..1524888)
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AA seq
248 aa
AA seq
DB search
MALYRSRGIVLRSIRYGEADRILDIYTRDAGLVSCIAKGIRRTRSRFGARLEPFSCVDFM
AYRGRTLDTITQAESLRSFRGVRERLDRLQAAAGMAGVLHALSGGTPDRRTFNLLYRALD
ALEKGEEGFGMIEASFGLKLAVLSGYAPRLDGCAECGGDVPGEGARFAPAAGGFLCRDCR
SDAPPDSFPVPPGTLGRLRELAALPLAEAASGRGLEEALRRVVRAHVLAHAPGAASLATP
AGTAGGRP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctctacaggagtagggggatagtactccgctccatacgctacggggaggccgac
aggatactggacatctacacccgggacgccgggctggtctcctgcatagccaagggcatc
cggcgcacccgctcccgcttcggggcgcggctggagcccttctcctgcgtggacttcatg
gcctaccgcgggcgcacgcttgacacgatcacgcaggccgagtcgctccgcagcttccgc
ggggtacgcgagcggctcgaccgcctgcaggccgccgccgggatggcgggcgttctgcac
gccctctccggcgggacgccggacaggaggaccttcaacctcctctaccgcgccctcgac
gccctggagaagggcgaggaggggttcggcatgatagaggcctccttcgggcttaagctc
gcggtcctctccggctacgctccccggctggacggttgcgcggagtgcggcggggatgtc
ccgggggagggcgcacgcttcgcccctgccgcgggcggctttctgtgccgggactgccgc
tccgacgccccgccggattctttcccggtgcccccgggaaccctcgggcggctccgggag
ctcgccgcgctccccctcgcagaggcggcctccggacgcgggctcgaggaggccctccgc
cgggtggtccgggcccacgtgctggcccacgctcccggggcggcctcgctggcaaccccg
gcggggacggccggcgggcgcccgtga
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