Rubrobacter xylanophilus: Rxyl_1518
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Entry
Rxyl_1518 CDS
T00368
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03030
DNA replication
rxy03430
Mismatch repair
rxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rxyl_1518
03430 Mismatch repair
Rxyl_1518
03440 Homologous recombination
Rxyl_1518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rxy03032
]
Rxyl_1518
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_1518
Enzymes [BR:
rxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rxyl_1518
DNA replication proteins [BR:
rxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rxyl_1518
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rxyl_1518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
ABG04480
UniProt:
Q1AVU8
LinkDB
All DBs
Position
complement(1536858..1537778)
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AA seq
306 aa
AA seq
DB search
MTVYLLLGDDEERKLRGLERLRRGRQAQTFDAAEDAPEAVVSACGSYSLFGGGAFVVVKN
LDAWNASQKAVLAGYLESPAEETDLVLLGGRLGARERLLAAAKRAGEVHVFERPTGRALV
RWIVGRAQRMGLDLTEEVARELALRCSEDKLRLLGELEKLSLYVGEGRPAAREDVEALCP
PDVEANIFAFVDALASGEPRRALPPLEGLLAAGEPPLRIAHMARRQFRLVLRARSLLERG
VPRPELARELKVPPFVARKLEEQARALGEEDLERALALTLRLESGLKGRSSLPEGLQVEL
AVLELL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgtaccttctcctgggcgacgacgaggagcgcaagctgcgcgggctcgagcgg
ctgcgccggggacgtcaggcccagaccttcgacgcggcggaggacgctccggaggcggtc
gtctcggcctgcggctcgtactccctcttcgggggaggggccttcgtggtggtgaagaac
ctggacgcctggaacgcctcccagaaggccgtcctcgccggttacctggagagcccggcg
gaggagaccgacctcgtgctgctcggcggcaggctgggggcgagggagaggctgctcgcc
gcggcgaagcgggccggcgaggtgcacgtcttcgagcggcccaccggcagggcgctcgtc
cggtggatcgtgggccgggcgcagaggatggggctggatctgacggaggaggtggcgcgg
gagctcgcgctgcgctgctcggaggacaagctgcgcctgctcggggagctggagaagctc
tccctgtacgtcggggagggaaggcccgccgcccgcgaggacgtggaggcgctgtgcccg
ccggacgtggaggccaacatcttcgccttcgtggacgcgctggcctcgggggagccgcgc
cgggcgctcccgccgctggagggcctgctcgccgcgggcgagccccccttgcggatcgcc
cacatggcgcggcgccagtttcgcctggtgctgagggccagatctctcctggagcgcggg
gttccgcgcccggagctggccagagagctgaaggtgccgcccttcgtggcccggaagctc
gaggagcaggcccgcgctctgggtgaggaggacctcgagcgggccctggcgctgacgctc
cggctggagagcgggctcaagggccgaagcagcctccccgaagggctgcaggtggagctg
gcggtgctggagctgctctag
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