Rubrobacter xylanophilus: Rxyl_1581
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Entry
Rxyl_1581 CDS
T00368
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00362
Benzoate degradation
rxy01100
Metabolic pathways
rxy01120
Microbial metabolism in diverse environments
rxy01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rxyl_1581
00624 Polycyclic aromatic hydrocarbon degradation
Rxyl_1581
Enzymes [BR:
rxy01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Rxyl_1581
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ABG04543
UniProt:
Q1AVN5
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Position
complement(1605680..1606414)
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AA seq
244 aa
AA seq
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MQHEPAQERRGILVPQEDELEQPPYLYPDYVGTRLRAPKEPLIILPKTLSDITGPIYGHH
RPGELDNDLTRQHEGEPQGQKIIVHGRVLDGDGRPVRNTLVEIWQANAAGRYRHKVDQHP
APIDPNFSGAGRTLTDDDGYYRFVTIKPGAYPWQNHYNAWRPAHIHFSLFGRAFRSRLVT
QMYFPGDPLFFQDPIFQSVRDEKARRRMISSFDLEATIPEEALGFRFDIVLEGRDATPFE
RPHA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcacgaacccgcgcaggagcggcgagggatcctcgtcccgcaggaggacgagctg
gagcagccgccctacctctaccccgactacgtcgggacgcgcctgagggcgcccaaagaa
cccctgatcatcctgcccaagaccctctcggacatcacgggcccaatctacgggcaccac
aggccgggcgagctcgacaacgacctcacccgccagcacgagggcgagccgcaggggcag
aagatcatcgtgcacggcagggtcctggacggcgacgggcgcccggtcaggaacaccctc
gtcgagatctggcaggccaacgctgccgggcgctaccggcacaaggtcgaccagcacccc
gcccccatagaccccaacttcagcggggcgggcaggacgctcaccgacgatgacggctac
taccgcttcgtcaccataaagcccggggcctacccctggcagaaccactacaacgcctgg
cgcccggcgcacatccacttctccctcttcgggagggcgttcaggagccggctggtgacc
cagatgtacttccccggcgacccgctcttcttccaggaccccatcttccagtcggtgcgc
gacgagaaggcccgccggcgcatgatctcctcgttcgacctggaggccaccatcccggag
gaggccctgggcttccgcttcgatatcgtgctcgagggccgggacgctacccccttcgag
aggccgcacgcgtga
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