Rubrobacter xylanophilus: Rxyl_1738
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Entry
Rxyl_1738 CDS
T00368
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00061
Fatty acid biosynthesis
rxy00071
Fatty acid degradation
rxy01100
Metabolic pathways
rxy01212
Fatty acid metabolism
rxy02024
Quorum sensing
rxy04146
Peroxisome
Module
rxy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rxyl_1738
00071 Fatty acid degradation
Rxyl_1738
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rxyl_1738
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rxyl_1738
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rxy01004
]
Rxyl_1738
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rxy04147
]
Rxyl_1738
Enzymes [BR:
rxy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rxyl_1738
Lipid biosynthesis proteins [BR:
rxy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rxyl_1738
Exosome [BR:
rxy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rxyl_1738
Exosomal proteins of breast cancer cells
Rxyl_1738
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Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABG04698
UniProt:
Q1AV80
LinkDB
All DBs
Position
complement(1767184..1768833)
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AA seq
549 aa
AA seq
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MLREEKRPWLSVYGDRIRPRIIEESLPAFLEDAARRFSSHTALTMGEREISYRELLELSE
GFAAALAGSGVCKGDRVGLMLPNCPEYVIGFFGTVRAGAAATQINPLYTGRELEHILSNS
GTQTAVVHAATYAKVKEVQPRTPLRRVVCVGEPEGGLSGGDTTFEEFLRSAPGPPPEVKI
DPEEDLASLQYTGGTTGVSKGAMLTHRNLLGGVQQTIDFLIEDPGDFPENGKVVAVAPLF
HIFGMTMVLLFGLRHGWNLLLVPKFQPDEMMQLIKREQPIMLAGVATLYMALHSYPRMED
YGLDRVLLYTSGGASVPVGLMRSFKQKTGRDIWEGYGLSEGAPVSFNTYLRGPVPGSVGV
PIPGTDVRVVDPETGEREMPVGEPGELVVKGPQVMKGYWNMPEETSLALRDGWLYTGDIV
RMDEEGYLYIVDRKKDMINVSGYKVYPREVEEVIYSHPEVVEAVVVGSPDPYRGEVPKAF
VVIRRRGGEGTSVSEEELIEHCRRELAPYKVPREVEFREELPKSAVGKLLRRVLAQEERS
RGQEQGSAG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggaagagaagcggccctggctatccgtctacggggacaggataaggcccagg
atcatcgaggagagcctgccggcctttctggaggacgcggcgcgcaggttttcctcccac
accgccctgaccatgggggagcgcgagatctcctaccgggagctgctagagctctccgag
ggcttcgccgccgccctcgcgggaagcggggtgtgtaagggcgaccgggtggggctcatg
ctccccaactgccccgagtacgtcatagggttcttcggcaccgtgcgggcgggggcggcc
gcgacccagataaaccccctctacaccgggcgcgagctggagcacatcctctccaactcc
ggcacgcagaccgccgtggtccacgccgcgacgtacgcgaaggtcaaggaggtgcagccg
cgcaccccgctgcggcgcgtggtgtgcgtcggcgagccggagggcggcctctccggcggc
gacaccaccttcgaggagttcctgcgctccgcgccgggcccgccccccgaggtaaagata
gaccccgaagaggatctcgcctccctccagtacaccggcgggaccaccggcgtctccaag
ggcgcgatgctcacccaccgcaacctgctcggcggggtgcagcagaccatagacttcctc
atcgaggaccccggagacttcccggagaacggcaaggtcgtcgccgtcgccccgctcttc
cacatcttcgggatgaccatggtgctcctgttcggcctccggcacggctggaatctgctg
ctcgtcccgaagttccagcccgacgagatgatgcagctcataaagcgcgagcagcccatc
atgctcgccggggtcgcgaccctctacatggcgcttcacagctacccgcggatggaggac
tacggactggacagggtgcttctctacacctccggcggggccagcgtgcccgtggggctc
atgcgctccttcaagcagaagaccggccgcgacatctgggagggctacgggctctcggag
ggcgcgccggtctcgttcaacacctacctcagggggccggtgcccggcagcgtcggcgtg
cccattcccggcaccgacgtgagggtggtggaccccgagacgggggagagggagatgccc
gtcggggagcccggcgagctcgtcgtcaaggggccgcaggtcatgaagggctactggaac
atgcccgaggagacctccctcgcgctgcgggacggctggctttacacgggggacatagtg
cggatggacgaggagggctacctctacatcgtcgaccgcaagaaggacatgatcaacgtc
agcggctacaaggtctacccgagggaggtggaggaggtcatctactcccacccggaggtg
gtggaggccgtcgttgtgggaagccccgacccctaccggggggaggtgccaaaggccttc
gtggtcataagaagaagaggaggggagggcacctccgtgagcgaggaggagctcatcgag
cactgcaggagggagcttgccccctacaaggtacccagggaggtggagttcagggaggag
ctgcccaagagcgctgtgggcaagctgctcaggcgggtgcttgcgcaggaggagcgctcc
cgcgggcaggagcaggggagcgcgggatga
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