Rubrobacter xylanophilus: Rxyl_1813
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Entry
Rxyl_1813 CDS
T00368
Name
(GenBank) RNA polymerase, sigma 28 subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rxyl_1813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rxy03021
]
Rxyl_1813
Transcription machinery [BR:
rxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rxyl_1813
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Sigma70_r4_2
HTH_16
Motif
Other DBs
NCBI-ProteinID:
ABG04772
UniProt:
Q1AV06
LinkDB
All DBs
Position
complement(1838353..1839267)
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AA seq
304 aa
AA seq
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MPGFGEVERSAVRSREGAPAEACCSDPEPETPELLAGYLDRIGRWRLLTRDGEIELSRRA
KKGDRKARQKLIEKNLRLVVSVAKKYRGYGLPFEDLIQEGNIGLMKAVEKFDPERGFRFS
TYATWWIRQAVQRAVADKGRTIRVPVHMTEKIRKVSRTFNELSLELEREPTDEEIARRLE
WDVEDVRLTISAMPDATSLDQPVSSEESASELGDFIEDERTSDTPDTVLKELESSQLKEA
IERLPERARYVLVRRYGLDDREPATLAELGDELKISRERVRQLQREAERLLKAGIRRTSP
RSIT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtttcggtgaggtcgagcggtcggcggtccggtcgcgcgagggggcgccggcg
gaggcctgttgcagcgatccggagcccgagacccccgagcttctggccgggtacttggac
cgcataggcagatggaggctcctgacgcgcgacggggagatagagctctccaggagggcc
aagaagggcgacagaaaggcccgccagaagctcatagagaagaacctgaggctcgttgtc
tcggtggccaagaagtaccgcggctacgggctgcccttcgaggatctcatccaggagggc
aacatagggctcatgaaggcggtcgagaagttcgaccccgagcggggctttcgcttctct
acgtatgcgacgtggtggataaggcaggccgtgcagcgggcggttgcggacaagggccgc
accataagggtaccggtgcacatgaccgagaagatccgcaaggtcagccgcaccttcaac
gagctctctctggagctagagcgggagcccaccgacgaggagatagcgcgccggctggag
tgggatgtggaggacgtgcggctgaccataagcgcaatgcccgacgccacgagcctcgac
cagccggtctccagcgaggagtctgcctcggagcttggggacttcatcgaggacgagcgc
acctccgacacccccgacacggtgctcaaggagcttgagagcagccagctcaaggaggcc
atagagcggctgccggagcgggcgcgctacgtgctggtgaggcgctacggcctcgacgac
cgggagccggcgacgctggcggagcttggggacgagctgaagatctctagggagcgggtc
aggcagctgcagcgcgaggccgagcggctgctcaaggcagggatccgccggacgtcgcct
cgctcgataacgtga
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