Rubrobacter xylanophilus: Rxyl_1961
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Entry
Rxyl_1961 CDS
T00368
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03030
DNA replication
rxy03430
Mismatch repair
rxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rxyl_1961
03430 Mismatch repair
Rxyl_1961
03440 Homologous recombination
Rxyl_1961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rxy03032
]
Rxyl_1961
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_1961
Enzymes [BR:
rxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rxyl_1961
DNA replication proteins [BR:
rxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rxyl_1961
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rxyl_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Mg_chelatase
AAA
DUF905
Motif
Other DBs
NCBI-ProteinID:
ABG04908
UniProt:
Q1AUM0
LinkDB
All DBs
Position
complement(1982472..1983551)
Genome browser
AA seq
359 aa
AA seq
DB search
MSGTRIFEGIVGNRAALRLLERALRSGEVSHAYLFHGPEGVGKRTVARRFGAALVAGGDE
AALGRALRGLHPDLTEVEPEGAFTTIGQVREVLRLAASRPFEGSRRVFVLRADTLNLQAA
NALLKTLEEPEGEAVFLLLAASREAVLPTIASRAQAVRFDPVPVGEVAGFLARRGFAEAG
LAAALGRGSVGLALRYAGGELGELREAVLEAALGPLGDFEDVHRAAGRITALAERVGEAR
EREALSAAEEPDRAARERARRAGRAARDGAVREALGLLCSVYRDAAAVAAGAPELVINAD
RGEELRRIVRERPGADWAGAAARAGEAALDLSYNVSPEAILEVTLSELRRKTSANSPAW
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgggacgcggatcttcgagggcatcgtcggcaaccgggccgcgctgcggctcctg
gagcgcgcgctgcggtcgggggaggtctcccacgcctacctgttccacggacccgagggg
gtggggaagcggaccgtcgcccgccgcttcggggcggcgctcgtcgcgggcggcgacgag
gcggcgctcggccgcgccctgcgcggcctgcaccccgacctcaccgaggtcgagcccgag
ggagccttcaccaccatagggcaggtgcgggaggtgctgcgcctcgccgccagccgcccc
ttcgagggctcccgccgggtctttgtcctgcgggcggacacgctcaacctccaggccgca
aacgccctcctcaagacgctggaggagcccgagggcgaggccgtctttctgctgctcgcc
gcctcccgggaggccgtcctcccgaccatcgcctcgcgggcccaggccgtgcgcttcgac
cccgttccggtgggggaggtggccgggttcctggcccggcggggcttcgccgaggccggg
ctcgccgcggcgctcgggagggggagcgtggggctcgccctccgctacgccgggggggag
ctcggcgagttgagggaggccgttctggaggcggccctcgggccgctcggggacttcgag
gacgtgcaccgggcggcgggcaggataaccgcgctcgccgagagggtcggggaggccagg
gagagggaggcgctctccgccgcggaggagcccgaccgggcggcgagggagcgggcgcgg
cgcgccgggcgggcggcgcgcgacggggcggtgagggaggccctcgggctgctctgctcc
gtctaccgggacgcggccgccgtcgccgccggggccccggagctcgtcataaacgccgac
cgcggggaggagctgcgccggatcgtgcgcgagcggcccggggccgactgggccggggcc
gccgcccgggccggggaagccgccctcgacctttcgtataatgtctccccggaggctatt
ctggaggtgaccctatcggagctgcggcggaagacatccgcgaactcccccgcctggtag
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