Rubrobacter xylanophilus: Rxyl_1988
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Entry
Rxyl_1988 CDS
T00368
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rxy
Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rxy03019
]
Rxyl_1988
Messenger RNA biogenesis [BR:
rxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Rxyl_1988
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
G8
Motif
Other DBs
NCBI-ProteinID:
ABG04935
UniProt:
Q1AUJ3
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Position
complement(2007974..2008861)
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AA seq
295 aa
AA seq
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MRNDSRGVPYLSLRLVDRTGSVDARMWKLSSELRRGLPDPCYVRVEGQTHDYRGTLQVKI
ERLRVLGREEVEPEDYLPASELDREALAREILEAGEELRNEHLRDLFLLMVSDEELWRAF
CEAPAAKGMHHARIGGLLEHSVHCLRLARSVAELYPVDRDLLLFGAIFHDVGKVRELSWG
EGGFSYTTEGRLQGHVVLGERLVASYIAQLPDFPGELALQVSHILLSHQGELEYGSPQEP
KTLEALLVHFIDNLDARAEMYLEGTRNVSEGGWSHHENALRRALFVPERPGEERG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaacgacagccgcggcgtcccctacctctcgctgcggctggtggaccgcacgggc
tcggtggacgccaggatgtggaagctctccagcgagctgcgccgggggctgcccgacccc
tgctacgtgcgcgtggaggggcagacccacgactaccggggcaccctgcaggtgaagata
gagcgcctgcgggtgctgggccgcgaggaggtggagccggaggactacctgccggcgagc
gagctggaccgggaggcgctggcccgcgagatcctggaggccggcgaggagctgcgcaac
gagcacctgcgcgacctcttcctcctcatggtctcggacgaggagctctggcgggccttc
tgtgaggccccggcggccaaggggatgcaccacgcccgcatcggcggcctgctggagcac
tccgtgcactgcctgcggctggcccgctcggtcgccgagctgtacccggtggaccgggac
ctcctgctcttcggggccatcttccacgatgtggggaaggtgcgggagctctcctggggg
gagggcggcttctcctacaccacggagggccggctgcagggccacgtcgtcctcggcgag
cggctcgtggcctcctacatcgcccagcttccggactttcccggggagctcgcgctgcag
gtctcgcacatcctcctctcccaccagggggagctggagtacggatcgccgcaggagccg
aagaccctggaggcgctcctcgtccactttatagacaacctggacgcccgggcggagatg
tacctggagggcacccgcaacgtgagcgaggggggctggagccaccacgagaacgcgctg
aggagggcgctgttcgtccccgaacgccccggggaggagaggggctag
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