Rubrobacter xylanophilus: Rxyl_2009
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Entry
Rxyl_2009 CDS
T00368
Name
(GenBank) Uncharacterised P-loop ATPase protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
rxy
Rubrobacter xylanophilus
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rxy03019
]
Rxyl_2009
Messenger RNA biogenesis [BR:
rxy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Rxyl_2009
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_16
AAA_21
Zeta_toxin
AAA_30
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABG04956
UniProt:
Q1AUH2
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All DBs
Position
complement(2030621..2031538)
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AA seq
305 aa
AA seq
DB search
MSEEAPHPTRTPAAQRRQIVVITGLSGAGKSNALRAFEDAGYFCIDNLPPRMIPEVMEMS
AGSPAGPEGVVVVADIRGRRYFGGELERVIDGVEGAGGWEKRLLFLEADDATLIRRYKES
RRPHPAARGGDVLEAIRSERRELAPLRERADVVVDTSGLSALDVRLRFKRLAESLSGRLT
VSLISFGFKHGAPLDVDTLFDVRFLPNPHYDPALRPLTGRDPAVREAVLAHPDAREFVER
VCGLLSFLIPRYAAEGKTYFTVGVGCTGGRHRSVAIAEELARRLGAGRIGGEVDLYVRHR
DLESG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggaggctccgcaccccacgcgaaccccggccgcgcagcggcggcagatcgtc
gtgatcaccggcctctccggcgccgggaagtccaacgccctgcgggccttcgaggacgcc
ggctacttctgcatcgacaacctcccgccccggatgatccccgaggtcatggagatgagc
gccggcagccccgccggccccgagggggtggtcgtggtcgccgacatccgcgggcggcgc
tacttcggcggcgagctggagagggtgatcgacggggtggagggggcaggggggtgggag
aagcggctgctgtttctggaggcggacgacgccacgctgatccgccgctacaaggagagc
cgcaggcctcaccccgcggcccgcggcggggacgtcctggaggccatccgctccgagcgg
cgcgagctcgccccgctgcgggagcgggccgacgtggtggtggacacctcgggcctctcg
gcgctcgacgtgcggctccgcttcaagcggctcgccgagtccctctccggccgcctgacg
gtcagcctgatctcgttcggcttcaagcacggggccccgctggacgtggacacgctcttc
gacgtccgctttctgcccaacccccactacgacccggccctccggccgctcaccgggcgc
gaccccgccgtgcgcgaggccgtgctcgcccacccggacgcgcgggagttcgtggagcgg
gtctgcggcctgctctccttcctcatcccccgctacgccgccgaggggaagacctacttc
accgtgggcgtcggctgcaccggcggacgccaccgctcggtggccatcgccgaggagctg
gcgcggcggctgggcgcggggcggatcggtggggaggtggacctctacgtccggcaccgg
gatctggagtccggctga
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