Rubrobacter xylanophilus: Rxyl_2060
Help
Entry
Rxyl_2060 CDS
T00368
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00061
Fatty acid biosynthesis
rxy00071
Fatty acid degradation
rxy01100
Metabolic pathways
rxy01212
Fatty acid metabolism
rxy02024
Quorum sensing
rxy04146
Peroxisome
Module
rxy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rxyl_2060
00071 Fatty acid degradation
Rxyl_2060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rxyl_2060
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rxyl_2060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rxy01004
]
Rxyl_2060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rxy04147
]
Rxyl_2060
Enzymes [BR:
rxy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rxyl_2060
Lipid biosynthesis proteins [BR:
rxy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rxyl_2060
Exosome [BR:
rxy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rxyl_2060
Exosomal proteins of breast cancer cells
Rxyl_2060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABG05005
UniProt:
Q1AUC3
LinkDB
All DBs
Position
complement(2088363..2090141)
Genome browser
AA seq
592 aa
AA seq
DB search
MRPEAEELGGIGNLVEALHRNAVGRGGKGALHRKVGGRWEAVSYGELYGMVRDFAAGLAG
LGVGRGDRVGLIARNRVEWAVTDFAVQSLGAATVPVYPTLEPEQMAHILADCEARVVVVE
DGELLGRVSSARGELPALEHVVVMEGEGATLFEEVLREGRERPLEGWEEGWRSLGREDVA
TIIYTSGTTGRPKGAVLTHGNILSNLEGIQDALTVYPEDVFLSFLPLSHVFERTCGQFLA
LGVGASVYYAESVEKVPENLREVRPTVMPSVPRLYEKMHDRVRAMVAGGSPVKRWLFGRA
VAAGRRRYEVLDRGGRPGLPLRAALAVYDRLVFRRLREAVGGRVRFFVSGGAKLDTEVGK
FFYAAGIKIMEGYGLTETSPVIACNRLEKPRFGTVGLPLSNLEVRISPEGEIQVRGPSVM
RGYFRDERSTEEAFTQDGFFRTGDIGSFDEDGYLTVTDRLKSLIVLSTGKNVAPQPIESA
LVTAPHISQAVVVGEGRKYVSALVVPDYRAVRATLGVGGTDEELAGDGRVQRLIEREVEE
ATRGFADYERPKKVALLPRELSQEAGELTPTLKVKTRVVQRRYGGYIERLYA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccggaggcagaggagctcggagggatagggaacctggttgaggccctgcaccgg
aacgccgtggggcgcgggggcaagggtgccctgcaccgcaaggtcggggggcggtgggag
gccgtctcctacggggagctctacgggatggtgcgggactttgccgccgggctggccggg
ctcggggtcggccggggggacagggtcggcctcatcgcgcgcaaccgggtcgagtgggcg
gtgaccgacttcgcggtgcagagcctcggggcggcgacggtgccggtctacccgacgctg
gagccggagcagatggcgcacatcctcgccgactgcgaggcccgggtggtcgtggtcgag
gacggggagctgctggggcgggtctcctcggcgaggggggagcttccggcgctggagcac
gtggtcgtgatggagggggagggggccaccctctttgaggaggtgctgcgggaggggcgg
gagcggcccctcgagggctgggaggagggctggcgctcgctcggccgggaggacgtggcg
acgatcatctacacctccgggacgaccgggaggcccaagggggccgtcctcacccacggc
aacatcctctccaacctggagggcatccaggacgcgctcaccgtctacccggaggacgtc
tttctctcctttctgccgctctcgcacgtcttcgagcgcacctgcgggcagtttctcgcg
ctcggcgtcggggcgagcgtctactacgccgagtcggtggagaaggtgccggagaacctg
cgcgaggtgcggcccaccgtcatgcccagcgtgccccggctctacgagaagatgcacgac
cgggtgcgggccatggtcgccgggggttcgccggtcaagcgctggctcttcgggcgggcg
gtggcggccgggaggcggcgctacgaggttctggaccgggggggccggccgggcctgccg
ctgcgggccgcgctcgccgtctacgaccggctcgtcttccggcggctcagggaggccgtg
ggcgggagggtgcgcttcttcgtctccggcggggccaagctggacaccgaggtggggaag
ttcttctacgcggccgggataaagatcatggagggctacgggctcaccgagacctcgccc
gtcatcgcctgcaaccggctcgagaagccgcgcttcgggaccgttgggttgccgctctcc
aatttggaggtcaggatctccccggagggggagatccaggtgcgggggccgagcgtcatg
cgggggtacttccgggacgagcggtccaccgaggaggccttcacgcaggacggcttcttc
cgcaccggggacatcggctccttcgacgaggacggctacctcaccgtgaccgaccggctc
aagagcctcatcgtgctcagcaccggcaagaacgtcgccccccagcccatcgagtccgcg
ctggtcacggccccccacatctcgcaggccgtggtcgtcggcgaggggcgcaagtacgtc
tcggccctcgtggtccccgactaccgggccgtgcgggcgaccctcggtgtgggggggacc
gacgaggagctcgccggggacgggcgcgtgcagcggctcatcgagcgcgaggtcgaggag
gccacgcgggggttcgccgactacgagcggcccaagaaggtcgccctgctgccgcgcgag
ctctcgcaggaggcgggggagctcaccccgaccctcaaggtcaagacccgggtcgtgcag
cggcgctacgggggttacatagagaggctctatgcgtga
DBGET
integrated database retrieval system
