Rubrobacter xylanophilus: Rxyl_2298
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Entry
Rxyl_2298 CDS
T00368
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00550
Peptidoglycan biosynthesis
rxy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rxyl_2298
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rxy01002
]
Rxyl_2298
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Rxyl_2298
Enzymes [BR:
rxy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rxyl_2298
Peptidases and inhibitors [BR:
rxy01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Rxyl_2298
Peptidoglycan biosynthesis and degradation proteins [BR:
rxy01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Rxyl_2298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABG05227
UniProt:
Q1ATQ1
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All DBs
Position
complement(2311245..2312399)
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AA seq
384 aa
AA seq
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MLSRSWPPRRLLAAALPLVLLAWAGPAALAQPSGVAADAWALADLRSGELLASHDAGERL
PMASTTKIMLAIVALREGGLDREVAVSPRAAAYAAPPYSNVGLRAGDVLSLRELLMASLI
SSGDDAAYALAEALGGGSVERLVEKMNREARRLGLEDTHFQNPVGLDGRRHRSSARDLVR
MSREAMQYPLFREIVATRYAVISTPDREIPLTNTNELLFTYPPATGIKTGTTPAAGPCLV
ASAASGDESYVAVVLDARADRFAASLRLLEYGFSAYDRRELVRRGERYASVEVPYRRGER
VPLVAGESLSALLGPGDRVRREVEVPDEPPGSARRGERLGRVVVWVGGERAGSVPLVAAR
GYEEASLWEKLWYTVEGFFSEEGG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgctttcgagaagctggccgccaagacgcctgctcgccgccgccctgccgctcgtcctt
ctggcctgggccgggccggcggcgctggcccagccctccggggtggcggccgacgcctgg
gcgctcgcggacctgcgcagcggcgagctgctcgcctcccacgacgccggggagcggctc
ccgatggcctcgaccaccaagatcatgctcgccatcgtcgccctgcgggagggggggctg
gaccgggaggtcgccgtctcgccgcgggccgcggcctacgccgccccgccctacagcaac
gtggggctgagggccggggacgtgctgagcctccgggagctgctcatggcctccctcatc
tcctcgggggacgatgcggcctacgccctcgccgaggccctcggcgggggcagcgtggag
cgcctggtggagaagatgaaccgggaggcccggcgcctcgggctcgaggacacccacttc
cagaaccccgtcgggctcgacgggaggcggcaccgctccagcgcgcgcgacctcgtgcgc
atgtcccgcgaggccatgcagtatcccctcttcagggagatcgtggccacgcgctacgcc
gtgatctccaccccggaccgcgagataccgctcaccaacaccaacgagctgctcttcacc
tacccgcccgccaccgggataaagaccgggaccaccccggccgcggggccctgcctcgtc
gcctcggccgcatcgggcgacgagtcgtacgtggccgtcgtcctcgacgcccgcgcggac
cgcttcgccgcctcgctgcggctgctggagtacggcttctcggcctacgaccgccgggag
ctcgtccgccgcggcgagcgctacgccagcgtggaggtcccctaccggcggggcgagcgc
gtgccgctggtggccggggagagcctcagcgcgcttctgggtcccggcgaccgcgtgcgg
cgggaggtggaggtccccgacgagcctcccggctccgcccggcgcggggagaggctcggg
agggtcgtcgtgtgggtcggcggggagcgggcggggagcgtcccgctcgtcgcggcgcgc
ggctacgaggaggcctccctgtgggagaagctgtggtatacagttgagggcttcttctcg
gaagagggagggtga
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