Rubrobacter xylanophilus: Rxyl_2382
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Entry
Rxyl_2382 CDS
T00368
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy00061
Fatty acid biosynthesis
rxy00071
Fatty acid degradation
rxy01100
Metabolic pathways
rxy01212
Fatty acid metabolism
rxy02024
Quorum sensing
rxy04146
Peroxisome
Module
rxy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rxyl_2382
00071 Fatty acid degradation
Rxyl_2382
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rxyl_2382
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rxyl_2382
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rxy01004
]
Rxyl_2382
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rxy04147
]
Rxyl_2382
Enzymes [BR:
rxy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rxyl_2382
Lipid biosynthesis proteins [BR:
rxy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rxyl_2382
Exosome [BR:
rxy04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rxyl_2382
Exosomal proteins of breast cancer cells
Rxyl_2382
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DUF4314
DHX37_C
Motif
Other DBs
NCBI-ProteinID:
ABG05310
UniProt:
Q1ATG8
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All DBs
Position
2392023..2393708
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AA seq
561 aa
AA seq
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MSVYASKPWLRLYPDHVPQELPPPQHSMADLFEASARRVPERDAIRYFDEAISYARLEDL
ASRFAAALVERGVGKGDRVAIFTQNNPQFLIAQYGAWKRGAIAVPLNPMFKHRELDYHLN
DSGAKALVCLEGLYREVAGEVVPGTRVEHVFTTSELDLLPEGAGYANLAGARKLRPEGTE
DLLEVLETTPPDGGARERVSPEDIAYLVYTSGTTGPPKGAVETHSNVAYNAEVYRTWMRM
GDEDSVLGVAPLFHITGLVGHGALAALAGIPLVLFHRFDPSEALRLIEKWRPTMTVGSIT
VFIALMNAPDAAGRDLSSLKKCYSGGAPIAPSITEQFEEKFGIYIHNIYGLTESNSPTHA
VPYGSRAPVDEKSGALSVGVPVPGCEARLVSLEDPSEEVPVGEQGEFAARGPMIFREYWN
KPEETERAFHEGYFLTGDVAVMDQEGWFYIVDRKKDMINVSGYKVWPREVEDVLYTHPAV
KEAAVVGAPDPYRGETVVAFVALKEGQRIPEEDLVSYCRERMAAYKYPRRIEFLEEVPKT
ATGKFLRRELRERAQSPQRTA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtctacgcgagcaagccctggctgaggctctatcccgaccacgtgccgcaggag
ctcccgcccccacaacacagcatggcggacctcttcgaggcctcggcccgccgggtgccg
gagcgggacgcgatccgctacttcgacgaggccatctcttacgcgaggctcgaggacctc
gcctcccgcttcgccgcggccctcgtcgaacgcggcgtcgggaagggcgaccgggtggcc
atcttcacccagaacaacccgcagttcctcatagcccagtacggtgcctggaagcgcggg
gcgatcgcggtccccctcaacccgatgttcaagcaccgggagctggactaccacctgaac
gactcgggcgcgaaggcgctggtgtgcctggaggggctctaccgcgaggtggccggggag
gtcgtccccggcacgcgggtcgagcacgtcttcaccacgagcgagctggacctgctgccc
gagggggcgggctacgcgaacctcgccggcgcccgcaagctgcgtcccgaagggacggag
gacctgctggaggtgctggagacgaccccgcccgacgggggggcgcgggagcgggtctcc
ccggaggacatagcctacctggtctacacctcgggcaccaccggcccgccgaaaggggcg
gtggagacccactccaacgtcgcctacaacgccgaggtgtaccgcacctggatgcggatg
ggcgacgaggactcggtgctcggggttgctccgctcttccacatcaccgggctcgtggga
cacggggcgctcgcggcgctcgcgggcatcccgctcgtcctcttccaccgcttcgacccg
agcgaggcgctgcgcctcatagagaagtggcggcccaccatgacggtcggctccataacc
gtgttcatcgcgctgatgaacgccccggacgccgccggcagggacctctcctccctcaag
aagtgctacagcggcggggcccccatcgccccctccatcaccgagcagttcgaggagaag
ttcggcatctacatccacaacatctacggcctcaccgagagcaactcgcccacccacgcc
gtcccctacggctcccgcgccccggtggacgagaagagcggcgccctctccgtcggcgtg
cccgtgcccggctgcgaggcgaggctggtgagcctggaggacccctcggaggaggtgccc
gtgggcgagcagggcgagttcgcggcgagggggcccatgatcttcagggagtactggaac
aagcccgaggagaccgagagggccttccacgagggctacttcctcaccggggacgtggcc
gtcatggaccaggagggctggttctacatcgtcgaccgcaagaaggacatgatcaacgtc
agcggctacaaggtctggccgcgggaggtggaggacgtgctctacacccacccggcggtg
aaggaggccgccgtggtgggcgcccccgacccctaccggggggagacggtcgtcgccttc
gtcgccctgaaggagggccagcgaatcccggaggaggacctcgtctcctactgcagggag
cggatggccgcctacaagtacccgcgccggatagagttcctggaggaggtgccgaagacc
gccaccggcaagttcctccgccgcgagctgcgcgagcgggcgcagagcccccagaggacg
gcctga
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