Rubrobacter xylanophilus: Rxyl_2984
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Entry
Rxyl_2984 CDS
T00368
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy03030
DNA replication
rxy03430
Mismatch repair
rxy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rxyl_2984
03430 Mismatch repair
Rxyl_2984
03440 Homologous recombination
Rxyl_2984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rxy03032
]
Rxyl_2984
03400 DNA repair and recombination proteins [BR:
rxy03400
]
Rxyl_2984
Enzymes [BR:
rxy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rxyl_2984
DNA replication proteins [BR:
rxy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rxyl_2984
DNA repair and recombination proteins [BR:
rxy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rxyl_2984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
UVR
GIY-YIG
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ABG05894
UniProt:
Q1ART4
LinkDB
All DBs
Position
complement(2989056..2990738)
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AA seq
560 aa
AA seq
DB search
MERVVGGDPRFAWEGPLLRAADPRGLDLREAPYVVFDLETTGSSAREGGITELGALKLVR
GRVVDRFSTLVNPGRPIEPFVARLTGITDEMVSGAPPAREVIPRFEEFAEGSVLVAHNAG
FDCSFLAAARGGRGLPNPVLDTLRLARLLVPGLRRYRLSALVSHFGVRQAPNHRALADAA
ATAGVFLHLLRLLRAAGVGSVGEALALRGGGARRIPPQKRHLAEGLPASCGVYYFLDGGG
GVLYVGKAKNLRARVRTYFNGGDGRRKVRRLVEEVAAVRFRTTGTELEALLLEAREIRRL
SPRYNTAGREEGGRWYIGFPRGEPYPVPERVSGEEAGDGFLLLLGPYRSAGMVDACVEAL
GRIFPLRRCSGEGGPCLYGQMGRCAPCMGMESGEYAREVVGGVAALLRGEDGGGRLEALR
RERDRLAAALEFEAAARLRDLVSGIERLRLARTLGTSGVPQAVVAPSTEPGMVEVFAFEG
GGLLAHGGFEAGDEEGLRGFAARARAARRGGSGGGVDEARVVLAYLRRRSGLVEVARLDG
GDGGLLEAARRVGRAGGMVQ
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggagcgggtggtcggcggcgacccccgctttgcgtgggaggggcccctgctgcgggcg
gccgacccgcggggcctggacctgcgcgaggcgccctacgtggtcttcgacctcgagacc
acggggtcttcggcccgcgaggggggcatcaccgagctcggcgcgctgaagctggtgcgg
gggagggtggtggaccgcttctccacgctggtcaacccggggcgtcccatagagcccttc
gtggcgaggctcaccggcatcaccgacgagatggtctccggggcccctccggcccgggag
gtgatcccccgcttcgaggagttcgccgagggctcggtgctcgtcgcccacaacgccggc
ttcgactgctcctttctggcggcggcgcgcggggggcgcggcctccccaacccggtcctg
gacaccctcaggctggcccggctgctggtccccggcctgcggcgctaccggctctccgcc
ctggtctcgcacttcggggtccggcaggcccccaaccaccgggccctcgcggacgccgcg
gccaccgccggggtcttcctgcacctgctgcgcctgctgcgggcggcgggggtggggagc
gtgggggaggcgctcgcgctccggggaggcggcgcgaggcgcatcccgccgcagaagcgg
cacctggccgaggggctgcccgcctcctgcggggtctactacttcctggacggcggcggg
ggcgtgctctacgtgggcaaggccaagaacctgcgggcccgggtgcgcacctacttcaac
ggcggcgacggccggaggaaggtccggcggctggtggaggaggtcgccgccgtccggttc
cgcacgacggggacggagctcgaggccctgctgctcgaggcgcgggagataaggcggctc
tccccccgctacaacaccgcgggccgcgaggagggggggcgctggtacatcgggttcccc
cgcggggagccctacccggtgcccgagcgggtctccggggaggaggccggggacgggttc
ctcctcctgctcggcccgtaccgcagcgcggggatggtggacgcgtgcgtcgaggcgctg
ggccgcatcttcccgctgcgccggtgctcgggggagggcgggccctgcctctacggccag
atggggcggtgcgcgccgtgtatgggcatggagagcggggagtacgcccgggaggtggtg
gggggcgtcgccgccctgctgcgcggggaggacgggggcgggcggctcgaggcgctgagg
cgggagcgggaccggctcgccgcggcgctggagttcgaggctgccgcccggctccgggac
ctcgtctcggggatagagcgtctgcgcctggcccgcaccctcggaacctccggcgtcccg
caggccgttgtcgccccctccaccgagcccggcatggtcgaggtcttcgccttcgagggc
ggcgggctgctggcccacgggggcttcgaggcgggcgacgaggaggggctgcgggggttc
gccgcccgggcgcgggccgcccggcgcggggggagcggaggcggggtggacgaggcgcgc
gtcgtcctggcctacctccggcggcgctccgggctcgtcgaggtcgcccgcctcgacggc
ggggacggggggctgctcgaggccgcccggagggtagggagagcgggcggcatggtacaa
tag
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