Rhagoletis zephyria (snowberry fruit fly): 108353944
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Entry
108353944 CDS
T08513
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
rze04137
Mitophagy - animal
rze04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108353944
04120 Ubiquitin mediated proteolysis
108353944
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
108353944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108353944
04121 Ubiquitin system [BR:
rze04121
]
108353944
03029 Mitochondrial biogenesis [BR:
rze03029
]
108353944
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108353944
Membrane trafficking [BR:
rze04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
108353944
Aggrephagy
Other aggrephagy associated proteins
108353944
Xenophagy
Other xenophagy associated proteins
108353944
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108353944
Mitochondrial biogenesis [BR:
rze03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
108353944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
IBR
Rad60-SLD_2
Dsc3_N
Prok-RING_4
Ubiquitin_5
VCIP135_N
Motif
Other DBs
NCBI-GeneID:
108353944
NCBI-ProteinID:
XP_017460623
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MSFLLELIQAFIQKMLALLSFGQKTITNSLSIYIKTNTGRTISVNLEPQWDIKNVKEIVA
PQLGLQPEEVKIIFAGKELSDATTIQECDLGQQSILHAIRTRPQPQRQRLQSTVMEEEPA
DAAGTTTPTGRATTSLSEEPSKPLCETLVDLQLLSDERVNINEEDRLRTKAHFFVHCTQC
NKLCKGKLRVRCSLCKGGAFTVHRDPECWDDVLKPRRITGHCESQEVACFDNATGNPPYT
EFYFKCGEHVSGGEKDFAAPLNLIKINIKDVPCLACTDVSETVLVFPCASQHVTCLDCFQ
QYCRSRLSERQFMPHPDFGYTLPCPAGCENSFIEEIHHFKLLSRDEYARYQRFATEEYVL
QAGGVLCPQPGCGMGLLVEPECKKVTCQNGCGVSYLLGNSG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttactagagcttatacaagcttttattcaaaagatgcttgccctgctatcg
tttggccagaaaactattaccaactcgctaagtatttatataaaaacaaatacgggacgc
acaatttctgtaaacttagagccgcagtgggacataaaaaatgtaaaggaaattgtagca
ccacaattggggctacaaccggaagaagtaaaaatcatattcgctggcaaagaactcagt
gatgcaacaaccattcaggaatgcgatttgggtcagcaaagcatattacatgccatacga
acgcggccgcaaccgcaaaggcagcggctgcagtccacggttatggaggaggaaccggcg
gatgctgcaggcacaaccacccccactggacgtgcgaccacttcgctctctgaagaaccg
tcgaagccgttgtgcgaaacattagtcgatttgcagcttttgagtgacgaacgcgtgaac
attaatgaggaagatcgcctacgtacaaaagcgcatttttttgtgcactgtacgcaatgc
aataagctatgcaaaggaaagctacgtgtgcgctgctcactctgcaaaggtggcgcattc
actgtgcatcgtgatcctgaatgctgggatgatgtgctgaaaccacgtcgcattactggg
cattgtgaaagccaagaagtggcttgttttgataatgcaacaggcaatccaccatacact
gaattttatttcaaatgcggtgagcatgtgtccggtggggagaaagactttgcagcgcct
ttgaatttaataaaaattaatataaaagatgtgccttgcttggcgtgtacagatgttagt
gaaaccgttctagtcttcccctgtgcatcgcaacacgtcacttgtcttgactgttttcag
caatattgtcgctcacgtttatctgagcgacaatttatgccacatccagactttggttac
accttaccatgtcctgcgggttgtgagaattcttttatagaagaaatacatcattttaaa
cttttatcgcgtgatgaatatgcgcgttatcagcgttttgcaaccgaggaatatgtgctg
caggcaggcggtgtattatgtccgcaacctggttgcggcatgggattgttggtggaacca
gaatgcaaaaaggtcacctgtcaaaatggttgtggtgtaagttacttactgggtaattct
ggctaa
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integrated database retrieval system
