Rhagoletis zephyria (snowberry fruit fly): 108354847
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Entry
108354847 CDS
T08513
Name
(RefSeq) probable elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108354847
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
108354847
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108354847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
FR47
Defensin_5
Motif
Other DBs
NCBI-GeneID:
108354847
NCBI-ProteinID:
XP_017461507
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MKPKKKLGVGLSREERSLIVIGEIIQELLKAHEDKKDVNLNRLKARISSKYGLESSPRLV
DIIAAVPQDAKKILLPKLRAKPIRTASGIAVVAVMCKXCPHINMTGNICVYCPGGPDSDF
EYSTQSYTGYEPTSMRAIRARYNPYLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMSLDEK
YRNDFIMKLHDALSGHTSRDIKEAIRYSEISHTKCIGITIETRPDYCLKRHITDMLNYGC
TRLEIGVQSVYEDVARDTNRGHTVKAVCESFQLGKDSGYKIVAHMMPDLPNVDFERDLEQ
FIEYFENPAFRSDGLKIYPTLVIRGTGLYELWKTGRYKSYPPSMLVDLVAKILALVPPWT
RVYRVQRDIPMPLVSSGVEHGNLRELALARMKDWGTDCRDVRTREVGIQEIHNKVRPYEI
ELIRRDYFANGGWETFLSYEDPEQDILVGLLRLRKCSPDTFQSELTEVGQCSIVRELHVY
GSVVPVNARDPTKFQHQGFGMLLMEEAARIAREEHGSVKLAVISGVGTRAYYRKLGYELD
GPYMSKMLIDVK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaaaaagaagttgggagttggcttaagccgcgaggaacggagtttgattgtc
attggtgaaattatacaggagcttctgaaagcacacgaggacaagaaagatgttaatcta
aatcgtcttaaagcacggatatcgtcaaagtatggattggagagttcaccacgtttggta
gacatcattgcggctgttccccaagatgctaaaaagatattgctgcctaaactgcgtgct
aagcccatacgcactgctagtggcatcgccgtagtcgcagtcatgtgcaagcnttgtcca
cacatcaacatgaccggaaacatatgcgtgtactgtcctggtgggccggacagtgatttc
gagtactccacgcaatcatatacaggttatgaaccgacatctatgcgcgctatacgtgcg
cgttacaatccctatctgcaaacccgacaccgcgttgaacagctcaaacaattgggacat
tcggtggataaagtggaattcatcgtgatgggtggcacatttatgagtttggatgagaag
tatcgaaacgactttatcatgaagctgcatgatgcactaagtgggcatacaagccgtgac
atcaaggaagctatacgttattcggaaatttcacataccaaatgcattggaatcaccatt
gaaacacgtccggattattgtctcaagcggcatatcacagatatgttgaattacggttgt
acgcgtttggaaatcggcgtacaatcggtgtatgaagatgttgcacgcgatactaatcgc
ggccatactgtgaaggcagtgtgtgaaagctttcaattgggcaaggattcgggttacaaa
attgtggcgcatatgatgcccgacttgccgaatgtggatttcgaacgtgatttggaacag
tttattgaatactttgaaaatccagctttccgctcggatggcttgaaaatctatccaacg
cttgttatacgcggaactggcctctatgaactatggaaaactggacgctacaagtcttat
ccaccatcgatgctggtcgatctggtggcaaaaatattggcactcgtgccaccatggacg
cgtgtctatcgtgtgcagcgcgatataccaatgccgctagtgagctctggcgtggaacac
ggcaatctacgcgagcttgccttagctcgtatgaaagattggggtacggattgtcgtgat
gtgcgtacacgggaagttggcattcaagaaatacacaataaagtgcgcccttatgaaatc
gaactcatacgacgcgactactttgccaacggtggttgggagacgttcctctcctacgaa
gatccagagcaggatatactggtgggactgttgcgtttgcgtaaatgctcgccagatacg
ttccaaagcgagctgactgaggttggacaatgttcgattgtacgcgaattgcatgtttat
ggatcggtagtgccggtcaatgcaagagatccaaccaagtttcagcatcagggtttcgga
atgttgctaatggaagaggcagctcgtattgcacgcgaggagcatggcagcgtaaaattg
gcagttatttctggagtgggcacacgtgcctactaccgtaaactaggctacgaattagat
ggcccatacatgtctaaaatgcttatagacgttaaataa
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