Rhagoletis zephyria (snowberry fruit fly): 108355017
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Entry
108355017 CDS
T08513
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108355017
09123 Folding, sorting and degradation
03018 RNA degradation
108355017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108355017
03041 Spliceosome [BR:
rze03041
]
108355017
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108355017
mRNA degradation factors
5'-3' decay
Lsm complex
108355017
Spliceosome [BR:
rze03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108355017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
108355017
NCBI-ProteinID:
XP_017461681
LinkDB
All DBs
Position
Unknown
AA seq
79 aa
AA seq
DB search
MSRKEALSQFINQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALDQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRV
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtaaggaggcactttcgcagttcataaatcaaattcatggacgccccgtggtg
gttaaactaaatagcggcgtggactatcgtggtgtccttgcatgtctggatggttacatg
aacatcgcactggatcaaacagaggagtacgtaaatggtcagctaaaaaacaaatatggc
gatgccttcatacgtggtaacaacgtgctatatatttccacgcagaaacggcgggtatga
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