Rhagoletis zephyria (snowberry fruit fly): 108355718
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Entry
108355718 CDS
T08513
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108355718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108355718
Spliceosome [BR:
rze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108355718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
WD_LRWD1
Nbas_N
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_NOL10_N
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108355718
NCBI-ProteinID:
XP_017462344
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
RLAEARSYRDLPLEVREGTTQELYKRLRTMEIGCSQVGDQRPVSSVCFSPDGQLIATSSW
SGLCKLWAVPSLEHRRTLRAHNVNADKVTWHPQATLSQDPQAVNLASCGVDGSVFLWALE
GETEEPLHSLTGHAPHRVASVAFHPAGTLLATACYDHSWRLWDLGAGGGPEELLHQEGHS
KGVHDVAFQGDGSLAASAGRDSFGRVWDLRTGRCIMFMEGHLKGIISVDFSPNGYQLVTG
SEDNTVKIWNIRQRKLEYTIAAHTNVVSRVRFDRNTAGGAYIASASYDATVKLWASPAWT
PIKTLAGHDGKVMGVDMSSGGGGYIASCSFDRTFKLWEPTLGH
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
cggctggccgaggccaggagctaccgcgaccttccgctggaggtaagggaggggacgacg
caggagctttacaagcgcctgcgaactatggagattggctgctcgcaggtgggcgaccag
cggccggtcagttcggtctgcttctcaccggacgggcagctcatcgccaccagttcctgg
tctggcctctgcaagctctgggcggtgccctcgctggagcaccggcggacgctccgagcg
cacaacgtcaacgccgacaaggtcacctggcatccgcaggccaccctttcccaggatcca
caggcggtgaacctcgccagctgcggcgtcgacggctccgtctttctatgggccctggag
ggagagactgaagagccgctgcactccctaaccggtcacgccccgcaccgagtcgcctcg
gtggccttccacccggcgggcaccctcctcgccaccgcctgctacgaccacagctggcgc
ctgtgggacctgggcgccggcggcggccccgaggagctcctccaccaggagggccactcc
aagggcgtccacgatgtcgccttccagggggacgggtcgctggcagcctctgcgggtcgg
gactccttcggccgggtctgggacctgaggaccgggcggtgtatcatgttcatggaggga
catctcaagggcatcatctcagtagacttcagcccgaatggctaccagctggtgacggga
agcgaggacaacaccgtcaagatttggaacattcgccaacgtaagctggagtacaccatc
gccgcgcataccaacgtggtcagtcgggtgcgcttcgaccgcaacaccgccggcggcgcc
tacatcgcctccgcctcctacgacgccaccgtaaagctgtgggcgtcgccggcttggacg
ccgatcaagacgctggcgggacatgacgggaaagtgatgggcgtggatatgagctccggc
ggtggcggctacatcgccagctgctcctttgatcggaccttcaagctgtgggagccgacg
cttggtcactga
DBGET
integrated database retrieval system
