Rhagoletis zephyria (snowberry fruit fly): 108356047
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Entry
108356047 CDS
T08513
Name
(RefSeq) protein strawberry notch isoform X1
KO
K26273
protein strawberry notch
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rze03036
]
108356047
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108356047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108356047
NCBI-ProteinID:
XP_017462697
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MPEAIGMSNYPSSSAAAAAAAAASAAAGYTGLPSLPFSTSQLMNMAAFAMASGAGGNGGA
GGGRGSGIGIGAGPGGLGSAAGSLSALLAAGAGLGMPGGLATLPSATLATNTAALAAAAG
GAGVLGGGGGGGGGGGGPGNYYQASSNLNMAASLLAQMSMGLGGFDTAPSTATSMSASSA
NAAAAVATPQVKTNAMIMQKIQALVAANPSFLTSGIPNQLLAQLFMQPMKMAPATVTAAP
PEEEEVDYEEMGVAETYAEYWPAKLKLGKKHPDPVVETASLSSVEPCDVYYKLAIPADTI
NSGYLSALQLESITYASQAHDHMLPDGSRAGFLIGDGAGVGKGRTIAGIIYENYLKGRKK
ALWISVSNDLKYDAERDLQDIGASKIVVHALNKFKYAKISSDVNNNCKRGVIFSTYSALI
GESNNKTGKYKSRLKQLLQWCGEDFDGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQN
KLPKARVVYASATGASEPKNMAYMVRLGLWGQGSAFPNFNDFIMAVEKRGVGAMEIVAMD
MKLRGMYIARQLSFHGVTFKIDEVALSKEFRKVYDQSVELWVEAMQKFTEAAELIDAESR
MKKTMWGQFWSSHQRFFKYLCIAAKVNHAVQVAREAIKYGKCVVIGLQSTGEARTLEQLE
RDEGELTDFVSTAKGVFQSLVEKHFPAPDRNRINRILGLGGYGEDKKSPIQSIIEEVTGR
REASVKDEPCSSSSSTAGSKRKASRQELRTKKSRKNSWNDSDDDSQQESEDSDYKMSNSE
SEESDAGARSDSCESSDFNPFFSGSDSDNDPWVARSKKKAKKKAKPKEQAGGGSSNNSAA
AASSATATGSAANNGALPAAISTVAPKRKGPVSTQDRIQDLLQKKQELKGTVTQIGVNGI
KLNYGPPPKDAIERACSMKEELLRKIELLGERLPPNTLDQLIDELGGPDNVAEMTGRKGR
VVQSDDGSIQYESRSEQDVPLETLNITEKQRFMNGEKDVAIISEAASSGISLQSDRRVRN
QRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISDLAGERRFASTVAKRLESL
GALTHGDRRATETRDLSQFNIDNKYGRTALETVMKTIMGYEAPLVPPPNDYKGDFFKDVA
GALVGVGIIVNSETNPGVLSLDKEYNNISKFLNRILGMPVELQNRLFKYFTDTLTAIINQ
ARRGGRFDLGILDLGAAGENVTRIKLVRFIRKHATGKAPAELHTVRVERGMIWQEAIDKW
ADLISEYEGFYVSHQVRNGKRTAILAVEIETPSTQQQSNSKKKEKGVSKKDMMFQIYRPN
TGLQVRHESLAELEKKYKKVPSEEAEPHWTQQYDASVNTCSHAYWNGNCRNVNLGNECEV
GLRQRVYNVLAGSVLSVWTRVEQVLAMRNANNKMQVIRLKTTEGEKIVGTLIPKSCHELL
LQDLKSDADRIEEMKF
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagctatcggcatgtccaactatccgagcagttctgctgccgctgcagcagca
gccgctgcctctgcggccgccggctatactggtttgccctcactgccattcagcaccagc
cagctgatgaatatggccgcttttgctatggcgagcggcgctggcggcaatggtggcgct
ggtggtggtcgtggtagtggcattggtatcggcgctggtcctggtggccttggcagtgct
gctggtagcttgagcgcgctgttggcggctggtgctggtctcggcatgcccggcggactt
gccacactacccagcgccacgctcgctaccaacacagctgctctggcagcagccgccggc
ggtgcgggtgtactgggtggcggcggcggcggcggcggcggcggcggcggtccgggtaat
tactatcaagcaagttcgaatctgaatatggcagcgtctttattggcgcagatgagcatg
ggtcttggtggcttcgatacagcgccatccaccgcaacgagcatgtcagccagcagtgct
aatgcagcagcagcggtagcgacgccacaagtgaaaactaacgcgatgattatgcagaag
attcaagctttggtagcggctaatccttcctttctcaccagcggcataccaaatcagctg
ctggcgcagcttttcatgcaaccaatgaagatggcgcctgccaccgtcactgccgcgcca
cctgaagaggaggaagttgattacgaagaaatgggtgttgctgagacttacgccgagtat
tggcctgcgaaattgaaacttggtaaaaaacatcccgatccagttgtggagaccgcttca
ctttcctccgtcgaaccctgtgatgtttactacaaactcgccattccagcagatactata
aatagcggttacttgagcgccttgcagctggaatcgatcacctacgcctcgcaggcgcac
gatcacatgctgccagatggctctcgcgcaggttttctgattggcgatggcgctggtgtt
ggcaaaggtcgcaccattgccggcatcatttacgagaactacttgaagggacgcaagaag
gcgctctggatttctgtttccaatgacttgaagtacgacgccgagcgcgatttgcaggat
ataggcgcgagcaaaattgtagtgcacgcgctgaataagttcaaatacgccaaaatatcg
tctgacgttaataacaattgcaagcgcggcgtcatcttcagcacatattccgcactaatt
ggcgaatctaacaataagactggcaaatataaatcacgcttaaaacagttgctgcagtgg
tgcggcgaagactttgatgggctcattattttcgatgagtgtcacaaggctaagaatttg
tgccccgtcggctcgggcaagcccaccaagactggtcaaacagttttggagctgcagaac
aaattgccaaaagcgcgagtcgtctatgcttcggcgacgggcgcttcggagccgaagaat
atggcgtatatggtgcgcttggggctttggggacaaggctcggcattcccgaactttaat
gacttcattatggccgtagagaagcgcggcgttggagctatggaaattgtagcaatggac
atgaaattgcgtggtatgtacatagcgcgccaacttagttttcacggcgtgacattcaaa
attgatgaggtggcgctgtccaaggagttccgcaaggtctacgatcagtctgtggagttg
tgggttgaagccatgcagaagtttactgaagccgctgaacttattgacgcagaaagtcgc
atgaaaaaaacaatgtggggacagttttggtcatcgcatcaacgcttcttcaagtatctc
tgcattgcggctaaggtcaatcatgcggtacaagtggcgcgcgaggctattaaatacggc
aaatgcgttgtcataggtctacaatcgacgggagaggctcgaacgctggagcaactggag
agagatgagggagaactgactgatttcgtgtccacagcaaagggcgtttttcaatcacta
gtggagaagcactttcctgcacctgatcgcaaccgcatcaatcgcatactcggcctgggc
ggctacggcgaagacaagaaatcgcctatccaaagcataatcgaggaggtaaccggcagg
cgcgaggctagcgtcaaagatgaaccctgctcctcgtcatcgagcaccgcaggcagcaag
cgtaaagcgtcgcgacaagagttgcgcacaaagaaatcgcgaaaaaattcctggaatgat
tctgatgatgattcacagcaggaatcggaagacagtgattacaaaatgtccaactccgag
tctgaggaatctgatgcgggcgcacgttctgacagctgcgaatcctccgacttcaatcca
ttctttagcggatcggatagtgataatgatccatgggtggcacgttcgaagaaaaaggcg
aagaagaaggccaagccgaaggagcaagctggtggtggtagtagcaacaatagtgccgcc
gcagctagcagcgccaccgcaactggcagtgccgctaacaatggtgcacttcctgctgct
atcagtacagtggcgcccaagcgcaaaggtccagtctccacacaagatcgcatacaagac
ctgctacagaagaaacaagaactaaagggtaccgtcacgcagatcggtgtcaatggcatc
aagctaaactatggtccaccgcccaaagacgccattgagcgcgcctgcagcatgaaggaa
gaactgttgcgtaaaattgagctactcggcgagcgtctcccaccgaacacactagaccag
ctgatcgatgagctaggcggccccgacaatgtcgccgagatgacgggccgcaagggtcgc
gtggtgcagtcagacgacggttccatacagtatgagtcacgttccgagcaggatgtgcca
cttgagacgctcaacatcaccgaaaagcagcgctttatgaacggcgaaaaggatgtggct
atcatatcagaggcggcatccagcggtatttcgctgcagagcgatcggcgcgtgcgcaat
cagcgccgacgcgtacacatcacgctcgagctgccttggtcagccgatcgcgcaatacag
cagtttggacgtacacatcgttccaatcaagtgaatgcacccgagtacatattcttgatt
tctgacttggctggtgagcgccgtttcgcatcaacggtcgcgaagcgtttggagtcgctt
ggggcgcttacgcatggcgatcggcgcgcaaccgagacgcgtgacttgtcgcagttcaat
atagacaacaaatatgggcgcacggcactggagactgtaatgaagacgattatgggctat
gaggccccgctggtgccgccacctaacgactacaaaggcgactttttcaaagacgttgct
ggcgcgctggtgggcgtgggcattatcgtaaatagtgagaccaatccgggcgtcttgagt
ttggacaaagagtacaacaacatttcgaagttcttgaatcgcatactgggtatgccagtg
gagctgcagaataggctattcaaatacttcaccgacacgttgacggctatcattaatcaa
gcgagacggggtggtcgctttgacttgggcattttggatttgggcgccgcaggtgaaaat
gtgacacgcatcaaactagttcgcttcatacgcaaacacgctaccggcaaagcacccgct
gagctgcatacagtgcgcgttgagcgcggcatgatctggcaggaagcaattgacaaatgg
gccgatctaatcagcgaatatgaaggcttctatgtgtcgcatcaggtgcgcaacggcaaa
cgcactgccattttggctgtggaaatcgaaacgccatccacacagcagcaatcgaacagc
aagaaaaaggagaagggtgtgagcaagaaagatatgatgttccagatttatcgccccaat
acgggcctacaagtgcgtcacgaatcgttggcggagctggagaaaaagtacaagaaggtg
cccagcgaggaggcggagccgcattggactcaacagtacgacgcatcggtgaacacctgt
tcgcacgcctactggaatggcaattgccgcaatgttaatttgggcaatgagtgtgaggtt
ggcttgcgtcaacgggtctacaatgtgttggctggttcggtgctctccgtttggacgcgt
gtcgagcaggtattggctatgcgcaatgccaacaataaaatgcaagtgatacggttgaaa
accaccgaaggtgaaaagattgtcggtacgcttataccgaaatcatgtcatgaactgctg
ctgcaagatctcaaatctgatgcagaccgtattgaggaaatgaaattctaa
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