Rhagoletis zephyria (snowberry fruit fly): 108356113
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Entry
108356113 CDS
T08513
Name
(RefSeq) RNA polymerase-associated protein Rtf1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108356113
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108356113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
GAAD
Motif
Other DBs
NCBI-GeneID:
108356113
NCBI-ProteinID:
XP_017462738
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MGKRRKQALIDSDEDSSDNESNLESELLSLAKKKPKTNSTQNSATALSESDSDSDWAQGA
STSTAGKKRIKKVNKESDSSDLEDNHSHKEKDASQKESTNREEGEVSDSDDKDESNTTDS
QSTAESTDSSSDSEFDDGYDENLMGDEDDRKRLNGLSEKERETEIFKRIEQRDLLKTRWE
IERKLKLARRGEKTTKVGGKKEKKKKVARKPKPKQKEEATEQKKIIPLEEKEPEEEKLPP
NVQEVGEPTVSADETLVARKISVDDQNAVDNLDHKERSKERKKNVEMNRTDDKRSTAMAM
LKAKREGKAKREEEEAKRQAERDREDEKEELEGVSTGKSSIKLKASEIYSDDSGSSDSDD
EKPSEKRSRSASSSKSSSESEDEDDTTKSPVYISTREELNKLRLSRFKMERFINLPMFER
TVMNCFVRISIGNNGQKPVYRVAEIVGVVETAKIYSLGKTRTNRGLRLKHGTQERVFRLE
FISNQEFTESEYAKWREICAQQNVPMPTVDTIERKQGDIKEALNYEFKDEDVDKIIEEKN
RFRNRPTNYAMRKTCLMKERDAAMLRGDYDVAQDLGQQIDELESRASELDKKRSSSISLI
SYINDRNRKRNVEDAEKAILEEARANRGMKISDPFTRRITQPRMGFKSVEKKDEPSVQQT
PTLPPAKRKVEESAAGGSKPTEPKTDYSLYALHDFDIDLDVSLLNTVPTTR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgtcgaaagcaggctttaatagactctgacgaggactctagtgataatgag
tctaatctcgaatcggaattattgtctttggcaaagaaaaagccgaaaacaaattcaact
caaaatagcgcaactgctttgtccgagtctgactcggactctgactgggcgcagggtgca
agcacatccactgcaggaaagaaacgaataaaaaaagtcaataaggaatcagattcttcc
gatttagaagataatcacagccacaaagaaaaagacgcatcgcaaaaagaatctaccaac
agagaagagggagaagtttcagatagcgatgataaagatgaaagcaatacaaccgactcc
caatcaaccgcagaaagtacagatagcagctcagattcagaatttgatgacggatatgat
gaaaacctcatgggagacgaggatgatcgcaaacgcctaaatgggttgtctgaaaaagaa
cgtgaaactgagattttcaagcgcatagagcaacgagatttgttaaaaacccgctgggaa
atcgaaagaaaattaaaactggctcgaaggggggaaaagaccacaaaagtaggcggaaag
aaagaaaaaaaaaagaaagtggccagaaaacccaagcccaaacaaaaggaagaagcaact
gagcaaaaaaaaattattccgcttgaggaaaaagagccggaggaagaaaaattaccaccc
aatgttcaagaagttggggaaccaacggtatcagcagacgagacgttagttgctcgaaaa
atttccgtagatgaccaaaatgctgtagacaatttagatcataaagagcgttccaaagaa
cgtaaaaagaatgtggaaatgaaccgaactgacgacaagcgtagtaccgccatggctatg
ttaaaagctaaacgtgaaggaaaagctaagcgagaggaagaagaggctaagcggcaagcg
gagcgtgaccgagaggatgaaaaagaagagctagaaggagtatctacaggaaaatcgtct
ataaaactcaaagcctctgaaatatactcagatgattcaggaagtagtgattcggatgac
gagaaaccatctgaaaagcgctcccgctcagccagcagcagtaaatcttctagcgaatct
gaagacgaagatgatacaacaaaatccccagtatatattagcacacgcgaagaactaaac
aaattgcgattatctaggttcaaaatggaacgttttattaatctcccaatgtttgagcgc
acagtaatgaattgctttgttcgcattagcataggcaataacggtcaaaaacctgtttac
agggtagctgagatagtcggagtagtggagactgctaaaatttatagcctgggaaaaact
cgtacaaatcgaggcttgaggcttaagcatgggacccaggagcgcgtttttcgcttagaa
tttatttccaatcaagagtttacagaaagtgagtatgccaaatggcgtgaaatatgtgcg
cagcaaaacgtgcccatgccaactgtagacacgattgagcgcaaacaaggggatattaaa
gaagctcttaattatgagttcaaagatgaagatgttgataaaataattgaggaaaagaac
cggtttagaaacagaccgactaattatgccatgagaaagacttgtctgatgaaagagaga
gatgcagcgatgttgcgtggagattacgatgtagcacaagatcttggtcagcaaattgac
gagcttgaaagtagggcatcggaacttgataaaaaacgttctagcagcataagtcttatt
tcatatataaacgatcgcaatagaaaacgaaatgtagaggatgcagaaaaagccattttg
gaagaagctcgtgccaatagaggcatgaaaatttcagatccattcacgcggcgtataaca
cagccccgcatgggctttaaatctgtggaaaaaaaagatgaaccttccgttcagcagacc
ccaactcttccaccggcaaaacggaaagttgaggaaagtgctgcgggcggctcaaaacca
actgaaccaaaaactgactacagtttatatgctttgcatgattttgacatcgatttggat
gtgtcactattgaatactgtacccacaacacgataa
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