Rhagoletis zephyria (snowberry fruit fly): 108357093
Help
Entry
108357093 CDS
T08513
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rze01009
]
108357093
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108357093
Enzymes [BR:
rze01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108357093
Protein phosphatases and associated proteins [BR:
rze01009
]
HAD phosphatases
Fcp/Scp phosphatases
108357093
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108357093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
BSH_Fcp1
LIG3_BRCT
PTCB-BRCT
Biotin_lipoyl
Motif
Other DBs
NCBI-GeneID:
108357093
NCBI-ProteinID:
XP_017463675
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSAMADGNNESSGESGGGSAGSITITAPAEHPIRINKWRVREGFPITSSQVILLYEITSS
DNSSEASSTKTLATSVVSVDKTLLKLKANRVGVVKKRLYKEGQLVPQGATILELAECAHT
TVIKDMCADCGADLRQNENGNTSEASVPMVHSIPDLKVTQKLAQKLGHDDTRRLLEDRKL
VLLVDLDQTVIHTTNDNVPNNIKGIYHFQLYGPHSPWYHTRLRPGTPVFLDRMSKFYELH
ICTFGARNYAHMIAQLLDPEGKYFSHRILSRDECFNATSKTDNLKALFPNGDSMVCIIDD
REDVWNMASNLIQVKPYHFFQHTGDINAPPGLSKHELDGEGLDFKDLKNLTTDTSKMDAI
DVESKEKVAESESSDGISERSETDTESKKDDIIVDVVKNDIKTNTEVIETSNVEPVDVEL
DVLAKDNVIDIPDANKATVSISDENYEDKLDNKLTSMETEAETTPKIKLPADPHQQIEIE
DPDDYLMYLEEILKNIHMRFYAIYDETQEIPDLKIIVPKIRSEVLRGKTLIFSGLVPTNM
QLEQSRAYFIAKSLGANVSQSIGPETTHLVAVNSGTFKVNAAKKNPNIKVVNANWLWTCA
ERWEHVDERLFPLDRKTKSRQRKPPAHCHSPEHVVNYSDKSEISPSSSAQQQQAKAPEKF
IDTINPLLSFSNADLADMNKEFDQFFESDSSSEDEHINIENPPVDKTLRKRRREEKEQDR
TREFFTRASDIIMGPGTNEDADKSSDGEDNDDDDESPSAKFRRGEKLPSDLEMGSDSDDG
SPGNEDSGDDGEWNMMGAALEREFLGLDD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaatggcggacggtaacaatgaatcaagtggcgaaagtggcggcggcagtgcc
ggcagcattacaataaccgcaccagcggagcaccctattcgaatcaataaatggcgcgtt
cgtgaaggtttccccataacttcttcccaagtgattttattatacgaaatcacaagtagc
gacaatagctcggaagcgtcgtctacaaaaactttagctacgtcggtagtttcagttgat
aaaactttgctcaaattaaaagcgaatcgtgtaggcgtggtaaaaaagcgtttgtacaag
gagggacagttggtaccgcagggagcgacgattttggagctggccgagtgtgcccacact
acagtgataaaagatatgtgtgctgattgcggtgcggatttgcgccaaaacgaaaatgga
aatacatccgaggcatctgtaccaatggtgcactccatccccgatcttaaagtaacacaa
aaacttgcacaaaagctaggccacgatgacacgcgtcgtttgcttgaagatcgcaagctc
gtactcctagtcgacttagatcaaacggttatacacacaacaaatgataacgtaccgaat
aatattaaaggcatttaccactttcaactttatggtccacactcaccgtggtatcacaca
cgtctgcgtccaggcacaccggttttccttgatcgtatgtcaaaattttatgaactacat
atctgcacttttggagcacgaaactacgcacacatgatagcacaattacttgatcctgag
ggaaagtatttttcacatcgtattctatctcgcgatgagtgctttaatgcaacaagtaaa
actgataatttgaaagctctctttcctaatggagattctatggtttgcataatcgacgat
cgcgaagatgtatggaacatggcatccaatttgattcaagtcaagccttatcattttttt
caacatacaggcgacataaatgcgccacctggtttatcaaagcatgaattagatggagaa
ggtcttgacttcaaagatttaaaaaaccttacaaccgatacgagcaagatggatgcaata
gatgtagagagtaaggaaaaggttgccgaatcagagtcctccgatggcatatctgagcgt
tcggagactgatacagaaagtaaaaaggatgatatcattgttgatgtcgttaaaaacgac
attaaaactaatacagaagtcattgagacatcgaacgttgaaccagttgatgtagagtta
gatgtattggcgaaagataatgttattgacatccctgatgccaacaaggcaactgtttct
atatctgacgaaaattatgaagacaaacttgataataaactgacatcaatggaaactgaa
gccgagacaacacccaaaataaaacttcctgctgacccccatcagcaaattgaaatcgaa
gatccagacgattatcttatgtatttggaggaaattcttaaaaacattcatatgcgattt
tatgctatttatgacgaaacgcaggagatacctgacttgaagattattgttcccaaaatt
cgttctgaagtacttcgcgggaagactttaattttttcgggtctagtacctactaatatg
caactagagcagtcccgcgcttacttcattgcaaaaagtttgggggcaaatgtgtcacaa
agtattggaccagaaacgacacatcttgttgctgtaaattctggtacgttcaaggtaaat
gctgccaaaaagaatccgaatattaaggtcgtcaatgcaaactggttgtggacatgtgct
gagcgctgggagcatgtagatgagcggctctttcccctggatcgtaaaacaaaaagcaga
caacgaaaaccaccagcacattgccatagtcctgaacatgtcgttaactacagcgacaag
tcagaaatatcaccgtcgagtagcgcgcaacaacagcaagctaaagcgcctgaaaaattc
atagacacaatcaatccacttttatcgttttcaaatgctgatttagccgatatgaacaaa
gagtttgatcagtttttcgagtcagattcatccagcgaagatgagcatattaatattgag
aatccccctgtagacaagacattgcgtaaacgaaggcgtgaggaaaaggaacaggatcga
acacgagaatttttcacgcgtgcatcggatattattatgggtcccggaacaaatgaggac
gctgataagagttcagatggcgaagacaatgacgacgacgatgagtcaccaagcgcaaaa
tttcggcgaggtgagaaattgccatcagacttggaaatgggcagcgattcggatgatggc
agtcctggcaatgaagacagtggggatgatggcgaatggaatatgatgggtgctgcgctg
gaacgagaatttcttggacttgatgattag
DBGET
integrated database retrieval system
