Rhagoletis zephyria (snowberry fruit fly): 108358255
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Entry
108358255 CDS
T08513
Name
(RefSeq) putative neural-cadherin 2
KO
K27892
neural-cadherin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rze04515
]
108358255
Cell adhesion molecules [BR:
rze04515
]
Cadherins
Cadherin related
108358255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Ig_Shg
Laminin_G_1
CADH_Y-type_LIR
EGF
Cadherin_CELSR2_9th
hEGF
Fibulin_C
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
108358255
NCBI-ProteinID:
XP_017464966
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MVDPLKIFWVLTNSTYLVTKFVRIGIADKNDAPPDFDRFLYETEIDENADLQTTVLTVNA
KNHNDSSNIRYQITGGNIGNAFGVQNTTGAIYVSSPLDYETRPRYELRLEASLNSKTNYT
TVIINVRDVNDNPPSFDRQTYRTQITEEDDRNLPKRILQVTATDDDVDRPMSIVYFLTGQ
GIDPDNAANSKFDINRTTGDIFVLKPLDRDQPHGRPQWRFTVFAQDEGGEGLVGYADIQV
NLKDINDNAPQFPQGIYFGNTTENGTAGSSVMTMTAVDYDDPNEGANAKLIYSIEKNVIE
EETGAAIFEIEPETGLVKTAVCCLDRERTPDYSIQVVAMDGGGLKGTGTASIRVKDLNDM
PPQFTKDEWFTEVDETNNTAIPELPILTVTVQDEDETNSFQYKVVPNSGFGAEKFAMVRN
SDGTGSLKITQPLDYEDPLQSSGFRFRIQVNDMGDDNDSDKYHVAYSWVVVKLHDINDNE
PHFEREHIEVAIYEDAKLGTILEQFRATDTDQAGHSKITYRIVRATNKKRQFAISPKGAV
SVQRSLDREETDRHFVRIHAVDDGITPRTATATLTVIVKDVNDNAPVFAKDFRPVLPENV
SPRKIVEIAARDADDRARGNGGPFTFRLDPLASDVIRSSFKVEQDRRGDNGNGIAIVSSL
RPFDREQQKSYLIPIEIKDNGTPPMTGTSTLTVIIGDVNDNKMLPGSKDVVVYNYQGQSH
DTQIGRVYVHDLDDWDVPDKKYYWEAQEHQRFKLDTDTGIIMMRAGTRRGRYQLRFKVYD
REQGQVDVPANMTVVVRDITHEAVQQAGSMRLTGISDEDFIRVWDYEQHKLQRSKLERFR
EKLAELLYTDRDYVDVFSVQLKSERPLLTDVHFAARSPTQQPYFKAVRLNGVVLMHREEI
EKEVGINITIAGIDECLQERKYCEGSCTNHVEIRNRTPYTVSVNKTSLVGVRLNTSAQCV
CKARTFSREETCRTHHCYNGGRCVDTRSGPKCVACPVGYNGPRCQQTTRSFRGNGWAWYP
ALQLCEQSHLSLEFITSEADGLILYNGPIVPPKPGEQLLRDFIAVELEQGYPRLLIDFGS
GTLELRVKTKKTLDDGVWHRLDVFWDSENVRMVIDFCRSAEVFEMDDGSAPEFDDNSCQA
RGLIPPFSETLNLNVPLQVGGIYRQHFDQTLYHWQYAFTSKGFDGCIRNLIHNSEHYDLA
FPALARNSYPACPQTDAVCLKIESTARCWEQGNCVASLVQAKCYCRPGWTGPTCSLPTIP
TTFKPQSYVKFALSFEPDRFSTQLQLRFRTREQQGELFRVSDQHQREYAILELSRGHLQL
RFNLNSLRAEEKRLQLNAIAVNDGQWHVVRVSRYGSAAMLELDGGEGRRYNETYNFAGHQ
WLSIDKQEGVYAGGKAEYTGVKTYEVQSDLQRSCLDDIRLDGKHLPLPPSMNGTQWGQAT
MARNLERNCPSNRPCSNVICPDPFDCVDLWNEYECTCSEGRIMSADTKGCVDRNECLDLP
CLNGATCINLEPRLRYRCICPEGYWGENCELVQESQRLKLSMGALGAIFVCLAIILALSL
IFLLYNRKRKTTKKKRAGPEKDVRETVISYDDEGGGEDDMTAFDITPLQIPIGAGGNMPP
DIATCKMPIIYPVMTLIPGQEVNVGFLMEERKKLFDMDLNGPPFDDLRSFTFEGSGIIAE
SLSSLASGTDDENQDYNYLSGWGPQFNALTAMYVHHDRTKLTRKVTTNEAAIAAATATAV
AVQGGATTNILAVATTAGTGARTTGMGRLVKTAAAVIQEENEDAEDGGNVAL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatccattaaagatcttttgggttctgacaaatagcacgtatctggttacaaaa
tttgtacgcattggtattgccgacaaaaacgacgctccaccggatttcgacagatttctc
tacgagactgaaattgatgaaaatgccgacctgcagacaactgtactcaccgtcaatgcc
aagaatcacaatgattcctcgaatattcgataccagatcacgggcggtaacataggcaat
gctttcggcgtacaaaacacaactggcgcgatttatgtttccagtccactcgactatgaa
accagaccaaggtatgaactccgtttggaagcgtcgctcaatagcaaaactaactacacc
accgtaataatcaatgtacgtgatgtcaacgacaatccaccgtcattcgatcgccaaaca
tatcgcacacaaatcactgaagaggatgatcgtaatcttcctaagcggatattacaggtt
actgccacggacgatgatgtagatagaccgatgagtattgtatatttccttaccggtcag
ggcatcgacccggacaacgcagcaaatagtaaattcgatataaatcgcacaacaggggat
atttttgtgttaaagccactggaccgtgatcaaccgcacgggaggccgcaatggcgattc
accgtctttgctcaggatgagggtggagagggattggtaggctatgccgatatccaagtt
aatctgaaggatatcaatgacaatgcgccacaattcccacaaggcatttattttggcaac
acaacagaaaatggcacggctggctcgtcggtgatgacaatgaccgccgttgattacgat
gatcccaacgagggcgccaacgccaaactcatttactccatagaaaagaatgtgatcgaa
gaagagacaggtgcggcgatattcgaaatcgaaccggaaacgggtcttgtaaagactgct
gtatgttgcttggaccgcgaacgtacacccgactactccatacaggtggttgcaatggat
ggtggcgggctgaaaggaactggcactgcatccataagagttaaagaccttaacgatatg
ccaccacaattcacaaaggacgaatggttcactgaggtggacgaaacgaacaatacggcc
atacccgagttgccgatactcacagtgaccgtgcaagatgaggacgaaaccaattccttt
cagtacaaagtggtgccgaatagtggttttggtgctgagaaattcgccatggtccgcaat
agtgacggcacgggttccttgaaaatcacacagcctctggactacgaggatccacttcaa
agtagtggctttcgttttcgcatacaagttaacgatatgggtgatgacaacgacagcgac
aagtatcacgttgcctattcgtgggtggtggtcaagctacatgacatcaacgacaacgaa
ccgcattttgaacgtgaacacattgaagtggcgatctacgaagatgctaaactgggtaca
attctcgagcaatttcgggcaacagataccgaccaggcggggcatagtaaaattacgtac
cgcattgtacgtgccacaaataagaaacgccaatttgctatcagcccgaaaggtgcggtg
agtgtgcaacgctcattggatcgcgaagaaacagatcggcatttcgtgcgaatacatgct
gtggatgatggtatcacgccgcgcacagcgactgccacattgacggtgattgtaaaagac
gtaaatgacaacgctccggtattcgcgaaggacttccgaccggtgttgccggagaatgtg
tcgccgcgcaaaattgtagagatagcagcgagagatgctgacgatagagcgcgcggcaac
ggtggaccatttacttttcgtctggaccccctagccagtgatgtgatacgttccagcttc
aaggtggagcaagacagacgtggagacaatggcaatggcatagccattgtctcttcgctg
cgacccttcgatcgcgaacaacaaaagtcctacctcataccaattgagattaaggacaac
ggtacaccacccatgaccggcaccagcactttgactgtcattattggcgatgtaaacgat
aataaaatgctgccaggcagcaaggatgttgttgtctataattaccaaggacaatcgcat
gacacgcaaataggacgtgtgtacgtgcacgatttggacgactgggatgtgccggacaag
aagtactattgggaagcgcaagagcatcaacgtttcaagctggacacggacacgggcatc
attatgatgcgtgcgggcacgcgtcgtggacgttatcagctgcgctttaaagtttacgat
cgggaacaggggcaagtggatgtgccggcgaatatgactgtggtggtgcgcgatattact
cacgaggcggtgcagcaggcgggttccatgcggctgacgggtatcagtgatgaagatttt
atacgcgtgtgggactatgaacaacataaactacagcggtccaagctcgaacggtttcgg
gaaaaactggcggagcttctgtacacagatcgtgattatgtagatgtgtttagtgtgcaa
ttgaagtcagagcgaccgttgttgacggacgtacatttcgcagcccgttcacccacacag
cagccctacttcaaggcagtgcgtttaaatggtgtggtgctcatgcatcgcgaagagatt
gaaaaggaagttggtataaatatcaccatagcgggcattgatgaatgcctacaggagcgg
aagtactgcgagggctcatgtaccaaccacgtggagatacgcaatcggacgccgtataca
gtgagtgtgaataaaacatcgctagtgggtgtgagacttaatacaagcgctcaatgtgtt
tgcaaggcacgcacctttagccgagaggagacgtgtcgcacacatcactgctacaatggc
gggcggtgtgtggacacacgcagtgggccaaagtgcgtcgcctgccctgtaggttacaac
gggccacgctgccagcagacaacgcgcagttttcgtggaaatggctgggcgtggtatcct
gctctgcaactgtgtgaacaatcgcatctcagtctcgaatttattaccagcgaagcggat
ggactaatcctctacaatgggcctatagtcccacctaagccgggggagcagttgttacgt
gattttattgccgtagagctggaacagggctacccgcgtctgctcatcgactttggctct
ggcactttggaattgcgtgtgaaaacaaaaaagacgcttgacgatggcgtctggcatcga
ttagatgtattttgggacagtgaaaatgtgcgcatggtaattgatttctgccgtagcgcc
gaagtgtttgagatggatgatggttcagcgcccgaattcgatgacaattcatgccaagca
cgtggtctgattccaccttttagcgaaacgctaaatctgaatgtaccactacaagtaggt
ggcatctatcggcaacacttcgaccaaacactataccattggcagtatgcctttacttct
aaaggcttcgatggctgcatacgcaatctcatacacaactccgagcactatgatttggcg
ttcccggcgttggcgcgtaatagctatcccgcctgccctcaaaccgacgcggtctgtttg
aaaatcgagagcacagcgcgctgctgggaacaaggtaattgcgtggcaagtctagtgcag
gccaaatgctactgccgacccggctggacgggaccgacctgcagcttacctaccatacca
accacattcaaaccgcagagttatgtcaagttcgcactcagcttcgaaccggatcggttt
agcacgcaactgcaactgcggttccgtacacgcgagcaacagggtgagctttttcgtgtt
agcgatcagcaccaacgtgagtacgcaatactcgaactcagtcgcggtcacctgcagctt
cgatttaacttaaattcgctgcgcgccgaggagaagcgcctgcaattgaatgccatagcg
gtaaatgatggtcagtggcatgtggtgcgtgtgagtcgttacggctcggctgccatgctc
gagctagatggtggtgagggacgacgctacaatgaaacgtacaatttcgctggtcatcaa
tggctctccatcgataaacaggagggtgtatatgctggcggaaaagcggagtatacgggc
gtgaaaacctatgaggtgcaatcggaccttcaaagaagctgtctggacgatatcagactg
gatggtaagcatttgccactgccaccttcaatgaacggcacgcaatggggtcaggcgacg
atggcgcgaaatctggagcgtaattgcccatcaaatagaccatgttcgaacgtaatctgt
ccggacccatttgattgtgtcgacctgtggaacgagtacgaatgcacgtgcagcgagggc
cgcatcatgtccgccgatacaaaaggatgtgtggatcgcaacgaatgtctcgatctacct
tgcttaaatggagctacgtgtattaatctcgagcctcgcctgcgttatcgctgcatctgt
ccggaaggctattggggtgaaaactgcgagttggtgcaagaaagtcaacggctcaagctt
agtatgggcgcgctaggtgctatcttcgtatgtttggccatcatattggcactttcactc
atcttcttgctgtataaccgcaaacgaaagacaacgaaaaaaaaacgtgccggcccagaa
aaagatgtacgtgaaactgttatcagctatgacgatgaaggtggcggtgaagatgatatg
acggcattcgatataacgccactgcagatacccatcggcgcaggcggtaacatgccacct
gatattgccacttgcaaaatgccaataatatatcccgtcatgactctaatacccggccaa
gaagtgaacgtcggttttcttatggaagagcgtaaaaaactctttgatatggatctcaat
gggccacctttcgacgacctacgcagcttcacctttgagggcagcggtatcatagccgag
tcgctgagctctttggcctcaggcactgacgatgagaatcaagactacaactatctgtcc
ggttggggaccgcagtttaatgcattgaccgcaatgtatgtgcatcatgaccgaacaaag
ctgacgagaaaagtcacaacgaatgaagcagccatagcagcagcaacagccaccgctgtg
gcagtgcaaggcggcgcaacaacaaatattttggcagtggcgacgacggctggtaccggg
gcaagaacaacggggatgggaaggctggttaaaacggcggcagcggttattcaagaagag
aatgaagatgctgaggatggaggaaatgtggcgttataa
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integrated database retrieval system
