Rhagoletis zephyria (snowberry fruit fly): 108358405
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Entry
108358405 CDS
T08513
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108358405
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108358405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
108358405
NCBI-ProteinID:
XP_017465215
LinkDB
All DBs
Position
Unknown
AA seq
1499 aa
AA seq
DB search
MDTEILEAVNSFLKVEPIEEAFLSVIVYKPNGEEEKSCSFTETILRKFEEVPQDNKEGLV
RQYLQRAATATNISRLRVLMNTLGKLAEAHAITARMLCDKILLCDRLVYENANFWIESFK
IIKRVLSLVDYKGVREIMKMCRDKAQTFPVNINVSFLPQLQALKDTLNYIFDRNNCLLPG
YFIANEIMKPPPYHWTINKMMTDFMEEFRRTAQMVSIIGHSHMLPIVECFGYADHMMNSW
KLDPNTLRFVFKGNLPYDSDLLEEQTKLLRYVLDQPYSKEMVSVMMSLQKQQKQRCNALE
EQLVNLIISAMEMTESNDSMMGSSFNVYEEQTSMNEWVWLHLSSQLIYFVLFQFVSFSHI
VTALYEKLSKKELRKGRDQLMWILLQFISGSIQKNPIANFLPTFKLFDLLYPEQEPLKLP
DCTKSSLLRQMAPICIWIHLMKKARLENMNINRPLPIALKNHHDFLQHLVMPNTMMSMSL
GNDFRIILICNAYSTNQEYFSRPMNILTEALNGNAKTAAGGQLPSAPFSMVVLDSLTVHS
KMSLIHSFFTQMIKQAQAKSSIPAPALVETYARLLVYTEIESLGIKGFLQQLLPAVFKHQ
AWGILHTLLEMFLYRLHHIPTQYRLQLLSHCTVVSPQTNKMQLNLCFESTALRLITGLGS
VEMQPQMSRYFSEKPPGSVASSESEELNRVLILTLARSMHMTGLGDELQPWCKELLNIIM
QNTPHSWASHSLACFPPALNEFFVQNNHPLENKQLLKKSVEEEYRNWTSMSNDNDIMNHF
IRPSTNPLFLCLLFKMIWETENVSPVAYKILEGISARALSAHLRKLCDYLVGEVANSNGK
DFIHKCVDTINNMIWKYNIVTIDRVVLCLALRTQEGNEAQVCFLIIQLLLLKTSELRNRI
QEFCKENHPDHWKQNNWHEKHLSFHQKYPEKFAPDESASHPPLPVYFSNVCLRFLPVLDI
VVHRFIELPIQHVHQICEVILDHLSVLYKFHDRPITYLYNTLHFYERILRERPSLKKKLV
SAITGAFCDIRPPNWCVSEPYKMFLQNQELLWNPELNYYINLVRRLSDTITGKNLFFNTD
WRFNEFPNAPAHALYVTCVELLSLPIAPSIVANNVVDVIVKGYSLIPQKEIHNYINAVGI
ILAALPETHWSVIYDRLQEALNSPKMVKWTYRFTAFELFNFKTVCESMIEKSYVLILAVA
HSIFHHMGGFKLASMTKYLAEKLKPCVRTEQQLVFLCHVFGPFLQRIDLEKPNTVAGIAI
MIYEMLDVVDKAHGQAPLEYIDTICDFLYHIKYIHVGNVIKNESEVIIKRLRPALQLRLR
FITRLNIEDINTEKNLNLPLVQQQQQQQQQQQHPPPTQQQLAAAVQQQAQQQQQLQQQQQ
QKANMVNAQSQQQQQVQMQAGGNAQPQQQQQPSQQQQSQQHQQQQQQSQQNVPMVAVGSG
SGAAGGGNAPGNHPQMANYNLMAQQQQQQQHQQQHMAANMGQHQPQQMQYFMQNMPPRY
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaaatattagaagcagttaatagcttcctgaaagtggaaccgattgaggag
gcgttcctcagcgttattgtctacaaaccgaacggcgaggaggagaagtcctgttcattt
actgaaaccattttgcgtaaattcgaggaggtacctcaggacaacaaagagggtttggtg
cgacaatatttgcaacgtgcggcaactgcaacaaacatttcgcgtctgcgtgtgctaatg
aatacactgggtaaattagcggaggcacatgctataacggcaagaatgctctgcgataag
attttgctatgcgacagactcgtttatgagaacgcaaatttttggattgagagcttcaaa
ataattaaacgcgtcttatcgctggtagattacaaaggagtgcgtgaaataatgaagatg
tgtcgtgataaagcccaaacatttcccgttaacataaacgtcagttttttaccacaacta
caggcgctgaaagatacattaaactacatatttgatcgtaataattgtctactgccaggc
tattttattgccaatgaaataatgaagccaccaccatatcactggacaattaacaaaatg
atgactgatttcatggaggagtttcgcaggaccgcgcaaatggtgtcaatcatagggcac
tcacatatgttacctattgttgagtgtttcggttatgccgatcatatgatgaactcatgg
aaattagatccgaatactttacgcttcgttttcaaaggcaatcttccttatgactcagat
ttgctagaagagcaaacaaaacttttgcgttatgtgcttgatcagccatattccaaggag
atggtctccgttatgatgagtttgcagaagcaacaaaagcaacgttgcaatgcgctcgag
gaacagttggttaatttgatcatatctgccatggaaatgaccgagagcaatgactctatg
atgggtagtagcttcaatgtttatgaagagcaaacctccatgaacgaatgggtatggcta
cacttatcgtcacagctgatatactttgttctctttcagttcgtaagtttttcacacata
gtgactgcattgtatgaaaagctctccaagaaggaattgcgaaagggacgcgatcagctg
atgtggatactattgcaatttatatctggtagcatacaaaagaatccaatagctaatttt
ctaccaacattcaagctgtttgacttgctttatcctgagcaggaaccactaaaattacca
gattgcacaaaatcctcattattgcgacagatggcgcccatttgtatttggatacacctg
atgaaaaaggctagactggagaatatgaatattaatagaccattaccaattgcattaaaa
aatcatcacgattttctacagcaccttgttatgccaaatacaatgatgtctatgagtttg
ggcaacgatttccgtattatactcatatgtaatgcatattcaacaaatcaagagtatttt
tcacgtccaatgaatatacttaccgaagcgttaaatggaaatgctaaaactgcagctggc
gggcaactaccctcagcaccgttctctatggttgttttagacagcttaactgtacacagt
aaaatgtcgctaatacatagcttttttacgcaaatgattaaacaagcgcaggccaaaagc
tcaatacctgcaccagctttagtagaaacctatgcccgactgctcgtttacaccgaaatc
gaatcgctgggcattaaaggattcttgcagcaattgctgcccgctgttttcaagcaccag
gcctggggcatactacatacgctgctggaaatgttcctatatcgtttacatcacatacca
acacaatatcgccttcagctgctttcacactgtacggtcgtttcgccgcaaaccaataaa
atgcaattgaatttgtgtttcgaatcgacagctttgcgtctaattaccggactaggctca
gtagaaatgcagccacaaatgtctcgctattttagcgaaaaaccacctggttctgtcgca
tcgagcgagagtgaggaactgaatcgtgtgctgatactaacgctggcacgttcaatgcac
atgactggactcggcgacgaactgcagccttggtgtaaagagctactcaatattataatg
caaaatacaccgcattcatgggcgtcgcactcactggcttgctttccgcctgctttaaat
gagttttttgtacaaaataatcatcctttggagaataagcagttgcttaaaaaatccgtc
gaggaagaatatcgtaactggacatcgatgtcaaatgacaacgacattatgaatcatttt
atacggcccagcacaaatccacttttcctttgtttacttttcaaaatgatttgggaaacg
gaaaatgtcagtccagtggcgtataaaattttagagggcattagcgcccgcgcactttca
gcacatttgcgcaagctatgcgactatttagttggcgaggtggccaatagcaatggcaaa
gatttcatacacaaatgtgtcgataccattaataacatgatttggaaatataatattgtt
acaattgaccgcgttgtactttgtttggccttgcgcacccaggagggcaatgaagcacag
gtttgcttccttattatacaattgctcctacttaaaacatcagaattacgcaaccgtata
caggagttttgcaaagagaaccatcctgatcattggaagcaaaataattggcacgaaaag
cacttatcatttcatcagaaatatcctgagaaatttgcacctgatgaatcggcatcacat
cccccattgcctgtttatttctcaaatgtatgtctgcggtttttgccagtgctggatatt
gtcgtacatcgcttcattgaattgcccatacagcatgtgcatcaaatctgtgaagtcata
ttggatcatttgagcgttctgtataaatttcatgatcgacctattacctatttgtacaac
acattgcatttctacgagcgcattttacgtgagcgtccttcgcttaaaaagaaattggtg
agcgccataaccggtgccttctgcgacatacggccaccaaattggtgtgttagtgaacca
tacaaaatgtttttgcaaaatcaagaattgctttggaatcctgaactcaattactatata
aacttagtgcgacgtctttcagatacaataacgggcaaaaatctcttcttcaacaccgac
tggcgcttcaatgaattccccaatgcgccagcacatgcactctatgttacatgcgttgag
ctactcagtttgccaatagcgccctcaattgtagcaaataatgtggtggatgttattgta
aagggttattcattgattccacaaaaagagatacataattacatcaatgctgtgggcata
atactcgctgctctgccagagacacattggagtgtaatctatgatcgcttgcaggaggca
ttaaattcgccaaaaatggtgaaatggacttatcgttttacggcctttgaacttttcaat
ttcaagactgtttgtgaatcaatgattgagaagagctatgtattaatactggcagtggcg
cactctatattccatcacatgggtggttttaagttggcctcaatgacgaaatatcttgct
gagaaactgaaaccctgtgtgcgcaccgagcaacagcttgttttcttgtgccatgtattt
ggaccctttttgcagcgtatcgacttggagaagcccaacactgtcgctggtattgcaata
atgatatatgaaatgcttgatgtggtcgataaggcgcatggacaagccccgctcgaatac
atagacacgatttgtgatttcctctaccacataaagtatattcatgtcggcaatgtcatc
aaaaatgagtcggaagtaataatcaagcgtcttcgacctgctttgcaactgcgcctgcgt
tttataacgcgcttaaatatcgaagacattaacacggagaagaacctcaatctgccactt
gtacaacagcaacagcaacagcaacaacagcagcaacatccaccaccaactcagcaacag
ttagctgctgccgtacaacagcaagcgcagcaacagcagcaacttcaacaacaacagcag
caaaaggcgaatatggtgaacgcccagagccagcaacagcaacaggtgcaaatgcaggca
gggggcaatgctcaaccgcagcagcagcaacagccctcacaacagcaacagtcacaacaa
caccagcaacagcaacaacaatcccaacaaaatgtaccaatggttgcagtgggcagtggc
agtggtgctgcaggaggtggcaacgcgcctggtaatcatccacaaatggctaattacaat
ttaatggcgcagcagcagcaacaacaacaacaccaacagcagcatatggctgcaaatatg
ggccagcaccaaccacaacaaatgcaatactttatgcaaaacatgccaccccgctattga
DBGET
integrated database retrieval system
