Rhagoletis zephyria (snowberry fruit fly): 108358540
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Entry
108358540 CDS
T08513
Name
(RefSeq) pre-rRNA processing protein FTSJ3-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rze03009
]
108358540
Ribosome biogenesis [BR:
rze03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108358540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
108358540
NCBI-ProteinID:
XP_017465430
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MGKKGKIGKQRKDKFYHLAKETGYRSRAAFKLIQLNRKFEFLQKSKVLIDLCAAPGGWLQ
VAQKHMPVPSIIIGVDLAPIKPIHNVITLQEDITTSKCRSLLSKELKTWKVDIVLNDGAP
NVGKSWLHDAFEQNRLTLSALHLACDFLIKGGWFVTKVFRSKDYNALMWVFKKLFQRVHA
TKPQASRNESAEIFVVCQNFIAPDKIDPKFFDPTYVFAEIKEKEQKMSKADLFKPLIKPK
KPKAEGYEDGNISLYTKIKVSDFIQSPDFIELLSKANEIVMDSNEVKNHPSTTGEILECL
KDLKVLGRKELTMLMDWRKEVRSTLVKKSYNDQGNEELEMNVDNNNENEDDEVDEIETEL
SEEAQKLKRKKRKVAKEKRKIEERLALKMVIKNDQLVQEEQDLFNLKNIRKASQLNAIKD
VEPNHEDDNQVNLDVAPSCAKKKRIQVDKESDEKYFDPDDSDGAGSDDDDDDEQLILSEN
KIFHRLGSDSAAHGSTGHDLDDDDDIELEELENRISNVTKGKSKAENEGKKEKTASQTSK
PTRKVTFDDDDDESNSSDSDEEGNKEGQGSKLNQKALTPEELALGALMIKSKKTKRDLLD
NGWNRFVHEDDDFIPSWFRKEEEAFYRKPVPVSSDMVKEYNDKLRDINSRPIKKVMEAKA
RKKKRTLRRLEKARIRAETVTDEADMTNKEKAQYIRSIYKKAVRKDKDNVQMVVGKRQFG
NRRPPGVKGRYKVVDSRLKKDKRNQAKSQKGGKKGRSKPSAPKGKGAFKNYAINNILFQR
GIYPSESVFLIQTVTQ
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaaggggaaaattggaaagcagcgtaaagataagttttaccatcttgctaaa
gaaactggctatcggtcccgtgccgcattcaagttgattcagctcaatcgaaagtttgag
tttcttcaaaagtcaaaagtgctgattgatctctgtgctgcaccaggaggatggcttcag
gtggctcaaaagcatatgcccgtgccgagcatcatcatcggcgttgatttagcaccaata
aagccaatccacaatgtgatcacattgcaggaagatattacaacttcaaagtgccgaagc
ttgctttccaaagaattgaagacatggaaagtggacattgttctcaacgacggtgctccc
aatgtgggtaaaagctggcttcacgatgcattcgagcagaatcgacttacactgtctgcc
cttcatctggcttgtgactttctcatcaaaggcggttggtttgtcaccaaagtgtttcgc
tccaaagactacaatgcactcatgtgggtgtttaagaagctctttcagcgagttcacgcc
acaaagcctcaggcttctcgaaatgagtctgccgaaattttcgtcgtctgccaaaacttt
attgctccagataaaattgatcccaagttcttcgatccaacgtatgtttttgctgaaata
aaggaaaaggagcagaagatgagcaaagccgacctttttaagcctttgattaaacccaaa
aagcctaaagctgaaggctatgaagatggaaatatatcgctgtacactaagataaaagtg
tctgattttattcagtccccagactttattgagctgctcagtaaagcgaatgagattgta
atggactcaaacgaagttaaaaatcatccctctacaactggcgaaattctcgaatgccta
aaagacttgaaagttctcggaagaaaagagctaacaatgcttatggattggagaaaagag
gttcgatcaactcttgtcaaaaagtcatacaatgatcaggggaatgaagagctggaaatg
aatgtggacaataataacgaaaatgaggatgatgaagtggacgagattgaaactgaactg
agcgaagaagcacaaaagttaaagcgaaaaaagcgaaaggtcgctaaagagaagaggaaa
attgaggaaagattggccctgaaaatggtcattaaaaatgatcaactggtccaggaagaa
caggacctgttcaatctaaagaacattcgcaaagcctcccagctcaacgctataaaagat
gttgagccaaatcatgaagacgacaatcaggtcaacttggacgttgcgccaagttgcgcc
aagaaaaaacgcattcaagttgataaagaatcagatgagaagtactttgacccggatgac
agtgatggagcaggcagtgacgatgatgacgacgatgaacagctgattttgtcggaaaac
aaaatattccatcgtcttggctctgattcagctgctcatggatctactggccatgatctc
gatgacgacgacgatattgagctggaagagttggagaatcgaatttccaatgttaccaaa
ggaaaatctaaagctgaaaatgagggtaaaaaggaaaagactgcttcacagacctccaaa
cctactcgaaaagtaacttttgatgacgacgacgatgagtctaatagttctgactcagat
gaagaagggaacaaagaagggcaaggaagcaagttgaaccagaaagcacttaccccggaa
gaactggcactcggtgcgctgatgataaagtcaaagaagactaaacgcgatctgctggac
aatggctggaatcgatttgtgcacgaagatgatgatttcataccatcctggttcaggaag
gaggaagaggcgttttaccgcaaaccagttcccgtgtcgagtgacatggtcaaggagtac
aatgataagctgagggatatcaactctcgaccgatcaagaaggtgatggaggcaaaggcg
aggaagaagaagcgtaccctgaggaggctggagaaggcgaggataagggcagaaacggtt
accgacgaagccgacatgaccaacaaagagaaggcacagtacattcgcagcatctacaag
aaggcagttcgcaaggataaggacaacgtgcagatggtggtgggcaagaggcagtttggc
aatcgacggcctcccggggtcaagggcagatacaaggtggtggattctcgtctgaagaag
gacaagcgaaaccaggcaaagtcgcagaagggaggcaagaagggacgaagcaagccaagt
gctccaaaaggcaaaggcgcattcaagaattacgctataaacaatattctctttcaacgt
ggaatttacccgtctgaatcggtatttcttattcaaactgtcactcaataa
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