Rhagoletis zephyria (snowberry fruit fly): 108358559
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Entry
108358559 CDS
T08513
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03030
DNA replication
rze03410
Base excision repair
rze03420
Nucleotide excision repair
rze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108358559
03410 Base excision repair
108358559
03420 Nucleotide excision repair
108358559
03430 Mismatch repair
108358559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rze03032
]
108358559
03036 Chromosome and associated proteins [BR:
rze03036
]
108358559
03400 DNA repair and recombination proteins [BR:
rze03400
]
108358559
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108358559
DNA Replication Termination Factors
ELG1-RFC complex
108358559
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108358559
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108358559
Check point factors
HRAD17(Rad24)-RFC complex
108358559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_14
Viral_helicase1
AAA_22
Rad17
RCF1-5-like_lid
RNA_helicase
AAA_16
nSTAND3
AAA_3
nSTAND_NTPase5
AAA_11
AAA_18
Mg_chelatase
RuvB_N
AAA_19
AAA_assoc_2
AAA_5
NTPase_1
AAA_24
ABC_tran
bpMoxR
AAA_2
DNAX_ATPase_lid
AAA_25
AAA_7
SLFN-g3_helicase
AAA_30
SRP54
AAA_28
MeaB
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
108358559
NCBI-ProteinID:
XP_017465451
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MDSTDRSKHIPWLEKYRPQVFEDIVGNEDVIDRFKHFAVHGNIPNFILAGPPGVGKTTTI
LCLARKLLGDIYKDAVMELNASNERGIDVVRNKIKMFAQSKMSLGPTQHKIVILDEADSM
TSGAQQALRRTMENYSNTTRFALACNSSEKIIEPIQSRCAVIRFSKVGDKQIADKIIDIC
NKECLQYDNEGIEAIVFTAQGDLRQAINNLQSVSDGFNKIISSEHVFKVCDEPHPNFIKD
MFKHVLDSDVDEAYAIIANLYHLGYSPEDIISNVFRICKSYPLPEHLKLDFIKEIGITQM
RICQGVNSLVQFSGLIAKMCRKSM
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggatagtacggatagaagcaagcacattccatggcttgaaaagtatcgtccacaagtg
tttgaggatattgtcggcaatgaagatgtcatcgaccgtttcaagcacttcgcagtgcat
ggaaacattcccaactttattctcgccggtccacccggtgtcgggaagacaactaccatc
ctttgcttggcaagaaagcttttaggtgacatttacaaggatgctgtgatggagttaaat
gcctctaatgaacgaggaattgacgtagtgagaaacaaaataaaaatgtttgctcaatcc
aaaatgtcgcttggtccaactcaacacaagattgttattctggatgaggcggatagcatg
acttcgggagcacaacaggcgcttcggcgaacaatggagaactactcaaacacaactcgt
tttgcgctggcttgcaactcctccgagaagatcattgagcctattcagtctcgatgtgcg
gtcattcgcttctccaaagtgggcgataagcagattgccgacaaaattattgacatttgc
aacaaggaatgcctacagtacgacaatgaaggcattgaagcgatcgttttcactgctcag
ggtgacctccgtcaggcgatcaacaatctgcagtccgtctccgatggttttaataagatc
atctcaagtgagcacgtttttaaggtttgcgatgagcctcatccaaacttcatcaaggat
atgtttaagcacgttttagacagtgacgtggacgaagcctatgccattatcgccaatctt
taccatctaggatactctcctgaagatatcattagcaatgtgtttcgcatttgcaaaagt
tacccactgccagagcacctaaagctggactttatcaaagaaatcggcatcacgcagatg
agaatatgccaaggcgtcaactcactggtgcagttttccggactgattgccaagatgtgt
agaaaaagcatgtag
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integrated database retrieval system
