KEGG   Rhagoletis zephyria (snowberry fruit fly): 108358582
Entry
108358582         CDS       T08513                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze00565  Ether lipid metabolism
rze01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rze00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    108358582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rze03036]
    108358582
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rze04147]
    108358582
Chromosome and associated proteins [BR:rze03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108358582
Exosome [BR:rze04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108358582
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_EML Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_WDR19_1st LisH_PAC1 LisH B-prop_COPA_B_2nd RMC1_N Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_HPS5 TMEM206 Invasin_D3
Other DBs
NCBI-GeneID: 108358582
NCBI-ProteinID: XP_017465476
LinkDB
Position
Unknown
AA seq 410 aa
MIMVLTPRQKQELENAIADYLENSGYTNALEAFKQDAKIQRDNDTGEKGMLEKKWISIAR
LSKKINELEDRNRKLETEYINGAPLRDKRSPTEWIPRPPERASMDGHTAPITKVIFHPVF
IQVVSASEDGTIKTWDYESGTYERTLKGHTNAVQDIAFSPNGKILASCSADLSVKLWDFQ
HFVCTKTLYGHDHNVSSVTFLPSGDYVLSCSRDKTIKMWDVSNGYCVNTFSGHREWVKMV
RVNTDGSLMATCSKDHTIIIWNLLNANSDVKVMFREHDHTVECIAWAPNSASKPISEAFE
EKKKELQGPYLISGSRDKTLKLWDVGTGVCLYTFIGHDSWVRDVCWHPAGKYFISASDDK
TIRVWDVTNKRLNKTLESHKHFCTCIDFHPTNPFVVSGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atgataatggtgctgacgccgcgccagaagcaagaattagaaaacgcaattgccgattac
cttgaaaatagtggctacacaaatgctctggaagcattcaaacaagacgccaaaattcaa
agggacaatgatactggcgaaaagggaatgcttgagaagaaatggatttccattgctcgg
ctatccaaaaagattaacgagctagaagacagaaatcgcaaattagagactgaatacatc
aacggtgctccactgagagacaaacgctcgcccaccgaatggattcccagaccacctgag
cgggcgtcaatggacgggcacaccgctccaataactaaagtaatattccaccccgttttt
atccaagtcgtctccgccagtgaggacggtaccatcaagacatgggactacgaaagtggg
acttacgagagaacattgaaaggccatacaaacgctgtgcaggacattgcgtttagcccc
aacggcaaaatactagcatcgtgctcagccgacctaagcgtcaagctttgggactttcag
cactttgtctgcaccaaaactctctacggccacgaccacaatgtgtcttcggtgacgttt
cttccgtcaggcgactacgtgctttcgtgttcccgtgataaaaccatcaaaatgtgggat
gtttcaaatggttactgtgtcaacacgttctctggtcatcgtgagtgggtgaaaatggtt
cgcgtcaacaccgatggctccttgatggcgacatgttcgaaagatcatactatcatcatt
tggaatttgctcaatgcaaacagtgatgtcaaggtcatgtttcgtgaacacgatcacacc
gtcgagtgtatagcctgggcccccaactctgctagcaaacccatatcggaggcttttgaa
gagaagaaaaaagagctccaaggtccttatttgataagtggctccagggacaagacgctt
aaactatgggacgtcggaacgggcgtttgtctgtacacattcatcggccacgacagctgg
gtgagagatgtgtgctggcatccagctggcaagtactttatctccgcctcggatgataag
accattcgagtttgggatgtaaccaacaagcgcctcaacaaaactctcgagtcgcataag
cacttttgcacctgcatagactttcaccctacgaatccttttgtggtcagcggcagcgtc
gaccagacggtcaaagtgtgggagtgccgatag

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