KEGG   Rhagoletis zephyria (snowberry fruit fly): 108358653
Entry
108358653         CDS       T08513                                 
Name
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120  Ubiquitin mediated proteolysis
rze04137  Mitophagy - animal
rze04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rze00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108358653
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108358653
   04137 Mitophagy - animal
    108358653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rze04121]
    108358653
Ubiquitin system [BR:rze04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108358653
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 108358653
NCBI-ProteinID: XP_017465584
LinkDB
Position
Unknown
AA seq 1066 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAF
NT seq 3201 nt   +upstreamnt  +downstreamnt
atgcaaatcttcgtgaagactttgactggcaagaccatcactctggaggttgaaccatcc
gatactattgagaatgtaaaagccaagattcaagacaaagagggtattccaccagatcag
caacgtttaatctttgccggcaaacaattggaagacggacgcaccttgtccgattacaac
atccaaaaggagtctacacttcatctggttcttcgtctacgtggtggcatgcagattttc
gtcaaaactttgacgggtaaaaccatcactttggaggttgagccttccgataccattgag
aatgtcaaagctaaaattcaggataaggaaggaatcccaccagatcaacaacgtttaatt
ttcgctggcaagcagttggaggatggacgcacattgtctgactacaatattcagaaggaa
tctacattgcatttagttttgcgcctacgtggaggtatgcaaatatttgttaaaacattg
actggcaaaaccatcactctggaggttgaaccttccgatactatcgaaaatgtgaaagcc
aaaatccaagataaggaaggtatcccaccagatcaacagcgtttaatcttcgccggcaag
cagctcgaagatggccgcaccttgtccgattataacatacaaaaagagtctaccctgcat
ttagtcctgcgtctccgtggtggtatgcaaatcttcgtgaagaccctaactggcaaaact
atcaccttggaggttgagccatcagacaccatcgaaaatgttaaagccaagatccaagat
aaggaaggtattcccccagatcagcagcgtttgatcttcgccggcaaacagcttgaagat
ggccgcaccttgtctgactacaacatccaaaaggagtctactctgcatttggtcctgcgt
cttcgtggtggtatgcagatatttgtgaagaccctaactggtaaaaccatcacgttggag
gttgagccatccgacaccattgagaacgtcaaagctaagatccaggacaaggagggtatt
cctccagatcagcagcgtttaatcttcgccggcaagcaactcgaagatggccgcaccttg
tccgactacaacatccaaaaggagtctacgctccacttggttctgcgtctgcgcggagga
atgcaaatcttcgtgaagaccctgactggcaaaactataaccttggaggttgaaccatcc
gatactattgagaatgtaaaagccaagattcaagacaaagagggtattccaccagatcag
caacgtttaatctttgccggcaaacaattggaagacggacgcaccttgtccgattacaac
atccaaaaggagtctacacttcatctggttcttcgtctacgtggtggcatgcagattttc
gtcaaaactttgacgggtaaaaccatcactttggaggttgagccttccgataccattgag
aatgtcaaagctaaaattcaggataaggaaggaatcccaccagatcaacaacgtttaatt
ttcgctggcaagcagttggaggatggacgcacattgtctgactacaatattcagaaggaa
tctacattgcatttagttttgcgcctacgtggaggtatgcaaatatttgttaaaacattg
actggcaaaaccatcactctggaggttgaaccttccgatactatcgaaaatgtgaaagcc
aaaatccaagataaggaaggtatcccaccagatcaacagcgtttaatcttcgccggcaag
cagctcgaagatggccgcaccttgtccgattataacatacaaaaagagtctaccctgcat
ttagtcctgcgtctccgtggtggtatgcaaatcttcgtgaagaccctaactggcaaaact
atcaccttggaggttgagccatcagacaccatcgaaaatgttaaagccaagatccaagat
aaggaaggtattcccccagatcagcagcgtttgatcttcgccggcaaacagcttgaagat
ggccgcaccttgtctgactacaacatccaaaaggagtctactctgcatttggtcctgcgt
cttcgtggtggtatgcagatatttgtgaagaccctaactggtaaaaccatcacgttggag
gttgagccatccgacaccattgagaacgtcaaagctaagatccaggacaaggagggtatt
cctccagatcagcagcgtttaatcttcgccggcaagcaactcgaagatggccgcaccttg
tccgactacaacatccaaaaggagtctacgctccacttggttctgcgtctgcgcggagga
atgcaaatcttcgtgaagaccctgactggcaaaactataaccttggaggttgagccatcc
gacaccattgaaaacgtcaaggccaagattcaagacaaggaaggtattcctccagaccag
caacgtttgatttttgctggtaagcagctcgaagacgggcgcaccttgtcggactacaac
atccaaaaggagtctaccctccatttggtcctgcgtctccgtggtggtatgcaaatcttc
gtgaagaccctaactggtaaaaccatcaccttggaggttgagccgtcagacaccatcgaa
aacgtcaaggccaagattcaagataaagaaggcattcctccagatcaacaacgtttgatt
ttcgccggtaaacaattggaagacggccgcaccttgtcggactacaacatccaaaaggag
tctaccctccatttggtcctgcgtcttcgcggtggtatgcaaattttcgtcaagactctg
actggcaaaaccatcaccttggaggttgagccgtcagacaccatcgagaacgttaaggcc
aagatccaggacaaagaaggtatcccaccagatcaacagcgtttaatcttcgccggcaag
cagctcgaagatggccgtactttgtccgattataacatccaaaaggagtctaccctccat
ttggtcctgcgtcttcgcggtggtatgcagatcttcgtgaagacactgaccggtaaaacc
atcaccttggaggttgagccgtcagacaccatcgaaaatgttaaagccaaaatccaggat
aaggaaggtattcctccagatcaacagcgtttgatttttgccggtaaacagttggaagac
ggccgtactttgtccgactacaatattcagaaggaatcgactctccatttggtgcttcgt
cttcgcggaggcgcattctaa

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