Rhagoletis zephyria (snowberry fruit fly): 108358695
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Entry
108358695 CDS
T08513
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rze03037
]
108358695
Cilium and associated proteins [BR:
rze03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108358695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ACBP4_C
Crescentin
BRE1
ERM_helical
Phasin
Motif
Other DBs
NCBI-GeneID:
108358695
NCBI-ProteinID:
XP_017465637
LinkDB
All DBs
Position
Unknown
AA seq
2023 aa
AA seq
DB search
MQAYRDNFKQTPCPTTFEQTSTGRLPFSKSSNRNRNATDKLTGCTSGTNPAVASSETAAL
PTPRMLSPTATGEPMSTAALLRQNHELRQRLSEEASSYRRRIDTYKQAQQNQANLVGRLQ
SKIQQYRQRCSDLEDRMHESIKHTPLPPPCAPKITTGPTSSQVMCSTSMALGQSSLPCSS
SLDSPPITCARDFIVHEDSGELCRKLEDEHSKCEQLIAQNNTLRQQLEESNRTNEAITND
LQKLTNDFSNLRDELLIKEDEYKEEEQAFKDYYNGEHNRLLKMWREVVAVKRAFKDMQSA
MKNEVGKMGLEISGITKDVTNSCGGLSFVLQQAKRITDEELVESRRENNDIKSQLATLKV
QYESARQEVLERDQRLLDLMNQLKKLEERCAQAESQAMLANRYNDEIERLNNSIREIAQA
VVQDAESADREADVAEANETMQHMHLTRDSGAGMGVPTKSPRRSSARASQAFAEGTISAV
QAALHKYQLALHDMQVKFQNTNENLRNTKTQLETSEGTKTLLTTKVHQLTEKLDASNSKL
SELLKERDSLQKTLEEIRQQKQQSEQGRLDLNSAFENLSGDFEKLQLKYGKLQKKIDLLE
DDKKAVELEIQRILKDKNIIEMNLRSEEDRGSRLREETISLREELNSVSLSRDLLEQQRI
ESDNIINLIEKQKSDLEYDLDKLLLEKCDLQEKLDKVSNSNSSTSDELKTIHSSLAQTQE
ERNKLKIEVDELQKEIATVRKELSSVEKARLELETDNLSYSEKLKCTQLEKEKILQDLAC
ITRDRGDIHNQLTALCRKKESLNEELMRTRQKLEQTVETNNRLNRNLEEMVKDVEEKQVV
IDLHEKETHRLQELLTALRTEKESLEAVLFDTNTQLEATEEKRQQLERDLQEALVREESL
KNSVTRLNKELEQCQRRAQETKNQLMNAARAAENDYNQKIASLKAVGEEAAKKHSEELYK
LKTGLEKRMAQALQALQTAKDDEIEKLQERLEALQAHLESLVQQHEEAMIRAENEKQQAL
LMAHRDKQALMEKLETATRELKNEQEGLERMKREHNAHDEKQRNAIAQLKDEISAMRTRE
EENKIKLEECIRKQEIQLTSVKEERDNLNRLCEELKMDIRLKEDKVEGINAELQDALRKA
KEGEAYIDSLRNELTDCRRQLADSNIEKDKYSNSNKELRDHVKHVESAKREQARAIEEAL
QKINALQDSKSSLENERTRLTTILKETENNMSKTVQELNATKNTLQKTQMDFAQKDEGGK
DLQNKLAAEIELKERSQQELCQIKKQLADLEENLCETRAELGRARCQSNQDEHRFHNREQ
ELLARIEEARGREKRLEDQKHNLEVCLADATQQIQELKARLGGAEGRIRALDEQLACVEL
HKRDTEHKLSSVAHTLRRIAGIQPDGSVNLSYRLISPTRRYSPIRNAMAAGSCHDYDARS
TSQCPDVPCDLDPDLVRKGVRNLMHQVAQIEREKDDMKVQLSAAKKQLQDAAEQQLRCDG
KVSKLQQMLRHLQEEKGNLDTERSMKISALNALEEKFKQKCDECQQMREKINQLEMQLAS
CNEENSQIEDRLEKCRTHGSKLENEKRHLQEELAKAEGRAAKSDLQRVAMEGDINRLQMA
LQEKDCNVRQAQERLDNQNRAMVQLEERCSSLKTTVDQMKDRLQKAAVTEMELRGELKAL
NKELSEQGHCSQSNEEKVKLLQKQSQAAENEKRILAERLDNAQSNLNELRRSQQAQLDRI
QRLQEQVTDLEVQRSALESQLRIAKWNQEAGDSGGMGKSADKREEEELSRQLKSSQREKS
ELRNKLQALQDKVKQLESERKSKFSGSGGTTAYDRAEKNTSYYDAGDFDSNRMETTAGNY
SCGLDHAVIEQEARDLRLKVRRLETLLAEKESELARLKARLHDSAKCADGGIDAERYRNA
QMHAEKLLDAREQSHRQQVMRLENQISLLREQLAQEAKRRQQYILRSSKANREMQHLRNT
LGDSLRHVSQHPLDPNLLESESRRLDNAVSMSLPPSTCRDYDQ
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttatcgcgataacttcaagcaaacaccttgcccaacaacatttgagcagacc
tcaacaggtcgattgcctttttctaagtcgtcgaatcgcaatcggaacgctacagataaa
ttaactggttgtacgagtggaactaacccagctgttgcatcttccgagactgctgcatta
ccaacgcctagaatgttaagcccaactgcaactggagagcctatgtcaacggctgcttta
ctacgacaaaatcatgagctgcgtcaacgtctgtcagaagaggcaagcagctataggcgt
cgtatagacacctataagcaggcgcaacaaaatcaagctaatctagttggtcgcttgcaa
tccaaaatacaacaatatcggcagcgttgtagcgatttggaagatcgcatgcatgaatcg
attaaacatacacccctgcctccgccatgcgccccaaagataaccaccggtccaacatct
agtcaagttatgtgttcaacttcaatggctttaggtcaatcaagcctgccatgctcatct
tcgttggactcaccacctataacctgtgcacgcgatttcattgtacatgaggatagtggt
gaactttgccgtaaacttgaggatgagcatagcaaatgtgaacaactcattgcgcagaat
aatacattgcgacaacaattggaagaatctaatcgcacgaacgaggccatcactaatgac
ctacagaagttgactaatgatttttccaatctacgagacgaattgcttattaaggaggac
gaatataaggaagaggagcaggcctttaaagattactacaatggcgagcataaccgtctg
cttaaaatgtggcgtgaagttgttgctgttaaacgagctttcaaagacatgcaatcggcc
atgaaaaatgaagttggaaaaatgggactagagataagcggtattaccaaggatgtaaca
aactcatgtggcggcctgtcattcgttctacagcaagcaaaacgaataacggatgaggag
cttgtcgaatccaggcgtgagaacaacgacataaaatctcaattggctacactgaaggtg
caatatgaaagcgcgcgtcaagaagtgctcgaaagggatcaacgactactcgacctgatg
aatcagttgaagaaacttgaagaacgctgtgcacaagccgagtcacaagcaatgttggcc
aatcgttataatgatgaaatcgagagactgaacaattctatacgtgaaattgcacaagct
gtcgtacaagatgctgaaagtgccgaccgtgaagcggacgtcgcagaagcaaacgaaaca
atgcagcacatgcacttaacgcgtgatagtggtgctggcatgggcgtgcccacgaaatcg
ccgcgtcgtagctcagctcgtgcatcacaagctttcgcagaaggcaccatatcagcagta
caggccgctctacataaataccaattggctttgcatgatatgcaggttaaatttcaaaat
accaacgaaaatttgcgaaatactaaaacacaactcgaaacaagcgaaggcacaaagacg
ctattgacgaccaaagtacatcagctcaccgaaaaattggatgctagcaattcgaagctg
tctgaactattgaaagaaagagatagtcttcagaagacactagaagagatacgtcaacag
aaacagcaaagcgagcaggggcgtctcgatttaaattctgcgtttgaaaatcttagcgga
gattttgagaagttacagctaaaatatggaaagttgcagaagaaaatcgatctgcttgaa
gatgacaaaaaggcggttgaactggaaattcaacgaatacttaaggacaaaaacataatt
gaaatgaatctaaggtctgaagaggaccgaggaagtcgcttgcgtgaggagacaatatcc
ttacgcgaagaattgaacagcgtaagccttagtcgcgatctgcttgagcaacaacgcatc
gaatccgataatatcattaatttaattgaaaagcaaaaatctgatttagaatatgatttg
gacaagctgctcttggagaaatgtgacttgcaagagaagctggacaaagtgtccaacagc
aactcatccacctcagacgaattgaaaacaatacatagtagcttagcacaaacacaagag
gagcgcaataaactcaaaatcgaagtagatgaattacaaaaggaaatagcaacagtgcgg
aaggagttgagcagcgttgaaaaggcacgcctagaattggaaacggataatttgtcatat
agcgaaaagctcaaatgtacacaattggagaaagaaaaaattctacaggacttggcatgt
atcactcgagatcgtggtgatattcacaatcaacttacagctttgtgccgcaaaaaggaa
tcccttaatgaagaactaatgcgaacacgtcaaaaattggagcaaactgtcgaaacaaat
aatcgtttaaatagaaatttggaagaaatggttaaagatgtggaggagaagcaggttgta
atagatttgcatgaaaaggaaacacatcgtctacaggaattgctgacggcattgcgtaca
gaaaaagagtccctagaagcagtacttttcgatacaaatactcaactcgaagccactgag
gaaaaacgtcaacagctcgaacgtgatcttcaggaggcactcgtgcgcgaagaatcactt
aaaaattcggttacacgcctgaataaagaattggaacagtgtcaacgccgcgctcaagaa
acgaaaaatcaactaatgaatgctgcacgcgcagctgagaacgactacaatcaaaagatt
gccagcctcaaagcggtaggcgaagaagcggctaagaaacattcagaagagctttataaa
cttaaaacgggattggagaagcgtatggcgcaagcacttcaggcactacaaacagctaag
gatgatgaaattgagaaattacaagagcgcctagaggcattacaagcgcatttagaaagt
ttggtacagcagcacgaagaggctatgatacgggcggaaaatgaaaaacagcaggcgctg
ttaatggcacatcgagataagcaagcattgatggaaaagttagagactgctacgcgggaa
ctaaagaacgaacaggagggactcgaacgtatgaaacgtgaacataatgcacacgatgaa
aaacaacgaaatgccattgctcagctaaaggatgaaatatccgccatgcgaacaagggaa
gaggaaaacaaaataaaactcgaagaatgtatacgaaaacaggaaatacagctaacgagt
gtaaaagaagaaagagataatcttaatcgactctgtgaagagttgaaaatggatatacga
ctcaaggaagacaaagtcgaaggaattaacgcagaactacaagatgcgctcaggaaagca
aaagaaggtgaagcttatattgatagcttgcgcaatgaactcacggactgtcgccgtcaa
ttggctgacagtaatattgagaaggataaatattccaacagtaacaaggagctgcgtgat
cacgtgaagcatgttgagagcgcaaaacgcgagcaggcgcgcgccattgaggaagctttg
cagaaaataaatgctttgcaagattccaaaagctcattggaaaacgaacgtacacgactg
acaacgatcttgaaagagaccgaaaataatatgagtaaaactgtacaggagctgaatgcc
accaagaatacattacagaaaacgcaaatggactttgcgcaaaaggatgaaggtggtaag
gacctccagaacaaattagctgccgaaatcgaattaaaggagcgtagtcaacaggaattg
tgccagattaagaagcagcttgccgatttagaagaaaatctatgcgaaaccagggcagag
cttggccgtgcacgctgtcagtccaatcaggatgaacatcgtttccacaatcgcgaacaa
gagctattagcgcgtatcgaagaagctcgcggtagagagaagcggttggaagatcagaag
cataaccttgaggtatgtcttgctgatgccacccaacaaatacaggagttgaaagctcga
ttgggcggcgctgaaggtcgaatacgcgcgctcgacgagcaactggcttgtgttgagctt
cacaagcgcgacacagagcacaagctcagctcggttgcgcacacattgcgtcgtattgca
ggcattcaacctgatggcagtgttaatctttcctatcgcttgataagcccaacaaggcgt
tatagtcccattcgaaacgcaatggcggctggcagttgccatgattatgatgccagaagc
acttcacaatgcccggatgtaccttgtgatctggatccggatctggtgcgcaaaggcgta
cgaaatctaatgcatcaagtggcacaaatcgaacgtgaaaaggatgatatgaaggtgcaa
ttatcggcagcgaaaaaacaattacaggatgccgcagagcagcagctgcgttgcgatgga
aaagtcagcaaacttcagcaaatgttgcgtcaccttcaggaagagaagggcaatttggat
acagaacgtagtatgaaaatttccgctttgaatgcactcgaagagaagtttaagcagaag
tgcgacgaatgccagcaaatgcgtgaaaaaattaatcagcttgaaatgcagttagcatct
tgcaatgaggagaactcccagatcgaggatcggctagagaagtgtcgtacacacggatcg
aaattagagaacgagaaacgtcatctgcaggaagaactagcgaaagcggaaggacgcgct
gcgaaatcggacctgcagcgagttgcaatggagggagatataaatcgcttgcaaatggcc
ttacaggagaaagactgtaatgtgaggcaggcgcaagaacgactcgacaaccagaatcgt
gcaatggtccaattggaagagcgttgttcatcacttaagactacggtggatcaaatgaag
gatcggctacaaaaggcggcggtcactgaaatggaattgcgtggcgaattgaaagcactg
aataaggagctctctgaacaaggacactgttcgcaatcaaatgaagaaaaagtaaaatta
ctgcaaaaacaatctcaagcagcagaaaacgaaaagcgtatacttgcagagcgtctggat
aatgcacaaagtaatttaaatgaattgcgacgcagtcaacaagcacaattggaccgtatt
cagcggcttcaagagcaagttaccgatttagaagtgcaacgttccgctttagagtcgcaa
ttacgcattgccaagtggaatcaggaggcaggtgatagtggcggtatgggcaaaagtgcc
gataagcgcgaggaagaagagctcagtcgacaactcaaatcgtctcaacgagaaaaatcc
gagttacgcaataaattacaagctttgcaggacaaagtcaagcaattggagtcggagcgt
aaaagcaagttctccggaagtggtgggaccacagcttacgatcgtgcggagaagaatact
tcgtattatgatgccggtgacttcgactcgaaccgcatggaaaccacagcgggcaattat
agctgtggtcttgatcatgcagtcattgagcaagaggcgagggacttgcgcttaaaagtc
cgtcgtttagaaacacttttagcggagaaagagtccgaactagcaagacttaaggcacgt
ttacacgatagtgccaagtgtgcagatggtggaatagatgcggagcgttaccgtaatgct
caaatgcacgctgaaaagttattggatgctcgcgagcaatcacatcggcagcaggtcatg
cgtttagaaaatcaaatatctttgctacgtgaacaattagcacaagaagctaaacgtcgt
cagcaatacattttgcgtagttcaaaagccaatcgcgaaatgcaacacctacgaaatact
cttggcgattcattacgacatgtttcgcaacatccattagatcctaatttattggaaagc
gaatcgagacgcttggataatgccgtttcgatgagtctaccaccgtcaacctgtcgggat
tacgatcaataa
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integrated database retrieval system
