KEGG   Rhagoletis zephyria (snowberry fruit fly): 108358866
Entry
108358866         CDS       T08513                                 
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
rze  Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:rze00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rze03400]
    108358866
Enzymes [BR:rze01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     108358866
DNA repair and recombination proteins [BR:rze03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    108358866
SSDB
Motif
Pfam: DEAD POLQ_helical Helicase_C HTH_61 ResIII HHH_5 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 108358866
NCBI-ProteinID: XP_017465863
LinkDB
Position
Unknown
AA seq 1132 aa
MSKNARKLEWCSPKLTAKRKCLDKKRINAVLQTENLFWPEDDEDSFFTASKVNYVINNKI
NTHSLEKNDTNLLCSQMTMGAHQEITLFGTQQNSLKLSNFKEDTFFSKSVLDTVMTEYEE
IVETKNDSCLPDNCHDDKSVLTVSAVEKLISYSPLELFTSINQNSMTDKTPLEDTALLNV
ESSNNFHQGRADESIFNTINLHSEQKTESQKQLKFDDTIFANINIEDLTIDEDKELFVEN
IQDDAGVQNSQRFLDDVAIFKVPHAPAPISCKAGQKIKVPQRDNFVSGSQYTVHSHLSNI
TSIANLSRLDWDSQAFSDKIENDFPSKGAFFGLPDKVKRMIFEYKGIQSLYEWQEECLNL
PAIHERRNLIYALPTSGGKTLVAEILMLREVLCREKDVLFILPYVSIVQEKVSAMSPFAI
AMNFIVDEYTAGKGKCPPMKRRKRKSIFIASIEKGAVLIDSLIEAQRADEIGLIVVDELH
LIGEKGRGATLEALLTKIMFIDVNIQIVGMSATIGNLEEVSSFLKADVYTRSFRPVELRE
FIKCGNDILEINTAGKTLDEVFVYSRNVNFNYSESLSRSDPDHLAGLVAECAPEHCVLVF
CPSRKNCENVALLLSRILPKKFVQHRKREKEDLMDALDKVCGVLGDVLAKTIPYGIAYHH
SGLTIDERKFIETAYRFGVLSVICCTSTLAAGVNLPAKRVIIRAPYVGSEFMTLCRYKQM
VGRAGRAGMGEAGESFLITTSRDNIRVGEMLFSPMDKAITSLDYEDCIGLQSLVLSAIGL
EIANCRTDLYRLVGCTLLSVQANQLGLSTEQMVLKLIREMFKHKVLELCASVASKKDIPD
ILTTQDVQNVSSRTSHEHRRLFISKSTRFQLTNIGRAAFKAGIDYKHAFAIHAELKLAQK
QLILTNYAHLLYLVVSFNSNAKGDELFPAEAGILYRVYMSLDDTTQALFKLLGFTEAVAV
KMAKTMSVQGPLELKLNRLYKVLVLIDILNVLPLHVVASRYKVERGMLQTLINQSTAAAS
AIVRLCEQLDAFWCFKSLFERISAKLDRCGTMELEPLLDLPAVKINRAKQLYSAGFKTIE
DIAKCKPIDLVRLVEHMPMKISKEIISAAKIILMKKLDYLEEEAEALKMCLT
NT seq 3399 nt   +upstreamnt  +downstreamnt
atgtcgaagaacgcgcgaaaactcgagtggtgttctccaaaattaacagctaaacggaag
tgcctagataaaaagcgaataaatgctgtgctccaaacggaaaatttattctggcctgaa
gatgacgaagatagttttttcacagcttctaaagtgaactatgtaataaataataaaatt
aatactcatagccttgagaaaaatgataccaacttactttgctctcaaatgactatgggt
gcccatcaggaaataacactctttggaacacagcaaaatagcttaaaattaagcaacttt
aaggaagatacttttttttctaaatctgtattggatactgtgatgactgaatatgaggaa
attgttgaaaccaagaatgatagttgtttaccagataattgccacgacgataagagcgtc
ctaactgtatctgcagtggaaaagttaataagctacagtccactagagctttttaccagc
ataaatcaaaacagcatgacagataaaacacccttggaagacacagcattattaaatgtg
gaaagcagtaataactttcatcaaggcagagctgatgagagcatatttaataccattaat
ttacacagtgagcaaaagactgaaagccaaaagcaacttaagttcgatgacaccatattt
gcgaatattaatatagaagatctgacgatagacgaggataaagaactttttgtagaaaat
attcaagatgatgcgggagttcaaaactctcaaagattccttgatgacgttgcaatattt
aaagtgcctcatgctcctgcaccaattagctgtaaggcaggacagaaaatcaaagttccc
cagcgcgacaattttgttagtggatcgcagtacacagtgcacagtcatttatcaaatatt
acatctattgctaatctttctcgactggactgggactctcaggcattttcagataagata
gaaaacgattttccaagcaaaggtgcattctttggactaccggacaaagttaaacgtatg
attttcgaatataagggcatacaaagtttatacgagtggcaggaggaatgcttgaatctg
ccagctattcatgagcgcaggaacttaatctatgccctcccaacaagcggcggaaagaca
cttgttgccgaaatattaatgttgcgcgaggtgttgtgccgtgaaaaggatgtacttttc
atactgccttatgtctcaatagtacaagaaaaggtcagcgctatgtctccatttgcaatc
gcaatgaattttattgtggacgaatataccgccgggaagggaaaatgtccaccaatgaaa
cggagaaaacgaaaaagtatatttatagcttcgattgagaaaggtgctgttttaatagac
agcttaattgaggcgcaacgtgcggacgaaataggtctgattgtggtcgacgaattgcat
ctgataggcgaaaagggacgaggggctacattggaagctttgcttacaaaaattatgttc
atagatgtaaatattcaaatcgtcggtatgagtgccactatcggaaacctggaagaagtt
tctagctttttaaaagcagatgtatatacacgcagctttcgacctgttgagttgagggag
tttataaaatgtggcaacgatattttggagattaatacagcaggcaaaacactggatgaa
gtgtttgtttacagtcgtaatgtgaatttcaattacagcgaatctttatcacgttccgac
ccggatcatctagctggattggtagcagaatgtgctcctgagcactgtgtgctggtgttt
tgtccatcgcggaaaaattgtgagaatgttgctttgcttttgagccgcattttaccgaaa
aaatttgtgcaacatcgaaaacgtgaaaaagaagatttaatggatgctttggataaggta
tgtggtgtgcttggggacgtcttggctaaaactataccatatggcatagcctatcatcac
tcgggccttaccattgatgaacggaagtttattgagactgcatatcgttttggtgtatta
agtgtaatttgttgcacatcgactttggcggcgggtgttaatcttcccgcaaagcgtgtt
atcatacgtgcaccctatgtgggttcggaatttatgactctttgtagatataaacaaatg
gtagggcgtgctggacgtgcaggcatgggtgaggccggtgaaagttttctaattacaaca
agtcgagacaatattcgtgttggcgaaatgcttttttcgcctatggataaagcaataact
tctttagattacgaagattgcataggtttacagagtctggttctaagtgcaatcggttta
gaaattgctaactgccgcacagacttatatcgtcttgtaggttgcactttgctttctgta
caagccaatcaactaggactttcgacagaacaaatggttcttaaacttattcgtgaaatg
tttaaacacaaagtattggaattgtgtgcttcggtggcatccaaaaaggacatcccagac
atacttacaacacaagacgttcaaaatgtaagcagtcgaacatctcatgagcatcgccgt
cttttcataagcaaatcgacacgctttcagcttacaaatattggtcgtgccgcttttaag
gcaggtattgattataaacacgccttcgcaatacacgcggagctgaaactcgcgcaaaaa
caactaatattaacgaactatgcacatctactgtatctagtagtgagtttcaattcgaat
gcaaaaggtgatgagttatttccagcggaagctggtatactttatcgggtatatatgtca
ttagatgatactacgcaagccctcttcaaacttctcggcttcaccgaagcggttgcagtg
aaaatggcaaagacgatgtccgttcaaggaccactggaactaaaattgaatcgtctctac
aaagtgttggttttgatcgacattttaaatgtactacctttgcatgtagtagcgtcaaga
tataaagtagaacgaggaatgttacagacgctcataaatcaatcaactgcagcggccagt
gcaatagtgcggctctgtgagcaattggatgccttttggtgttttaaatcactgtttgag
cggataagtgcgaaattggatcggtgtggtacaatggagttagaaccattacttgatttg
ccggccgtaaaaataaatcgtgccaaacaactttacagtgcgggcttcaagactattgaa
gacatagctaaatgtaaaccaattgatttagtgcgtttggtggagcatatgccaatgaaa
atttcgaaggaaattatctcggctgcaaagattatactaatgaagaagttggactaccta
gaggaagaggcagaagcattgaaaatgtgtctgacatag

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