Rhagoletis zephyria (snowberry fruit fly): 108358913
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Entry
108358913 CDS
T08513
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108358913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108358913
Membrane trafficking [BR:
rze04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108358913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
VWA
Sen15
Motif
Other DBs
NCBI-GeneID:
108358913
NCBI-ProteinID:
XP_017465929
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MNPNVYGAPPQQPQYATGWPSAPQQPTQPGGVPPQMRASSGGGYPPNSMPPTSGASVLGG
VPGTQPPQQNYGQGHQPGVLNGNYQQQLTSSMSGLAMNPLKQQTPVPPQNNTPYANANIP
DAPISAPPTIAGAPDAPPLTNGPPTGGQSQQPLPSNNNNIPAGPYANGQASKTPQPQVPP
SMYSPAPNAATPPMQSVPGGPNQMTVNSAGLPGLPHMPPAKPSTGPQLPGQLPVSAAPPT
SAAGAMPQYQPPGAQQIPPRPGQLPQPGIPQPQPQPAVLPGQPGLPPTSAAATLPPQPGM
PPMPGYPSQPQPLGYPPLPQQQQQQPQQAGYPAQPPQPGYPPQPGQTGYPPQPQQPGFPP
QQPGYPPQPPMQGGYAGQMMPPTQPGQPPMPGRPGFNQPPAPPGNMYQQPQQYPQAQRRL
DPDQMPNPISVIIENQRNAGGAFVTNQPGLLPPLVTTKYVVQDQGNSSPRYVRSSLYCIP
ATSDLLKTTALPFTLLVSPMARTVEGEYEPPIVNFGELGPIRCNRCKAYMSPNMQFVDAG
RRFQCLMCKVTTEVPTEYFQHLDHTGQRVDKYERPELVLGTYEFLATKDYCRNNTPPEIP
AFVFVIDVSYNTIKSGLVHLLCSQVKQILKHLSVDQGQEKSKMRVGFITYNSTVHFYNIK
SSLAQPQMMVVGDVQDMFMPLLDGFLCHPEESDALIDALMEQIPKMFVDTKETETVFYPA
IQAGLEALKASNCAGKLLVFNSTLPIGEGRGKLKNRDDRKLLGTEKEKTVLTPQCNSYNA
LGQECVQNGVSVDLFLFNNSYIDIATVGQVSRLSGGEVYKYTYFQADLDGNRLIEDIIKN
VSRPIAFDAVMRVRTSAGIRPTDFYGHFFMTNTTDVELASIDCNKAIAIEIKHDDKLPPE
ENIYLQIALLYTSVSGQRRLRILNLALRATTTIAEVFKCCDLDAMMLFFAKQACFKLLEL
TPKQVKDNLINRSAQILACYRKHCTSPTSAGQLILPECLKLLPLYVSCLMKNDAISGGSD
MTLDDRSYVMQFVMTMDLNMSVSYLYPRFIPIHNVDIDDNELPMSIRCTHEKMSEDGAYI
LENGVHLFVWLGQSCPQSFIQPIFGVQCTQQVNAERFAIIGETPLAQRVRNIIDTIMKER
TRNMRVTCVRQNDKLESVFRHFLIEDRGTDGSPSYVDFLCHMHKEIKDLLS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaacgtctacggagcaccaccacaacaaccacaatatgcaacgggctggccg
tcggctccacagcagccaacgcaaccaggtggagtaccacctcaaatgagagcgtcgagt
ggcggtggctacccacccaacagcatgccaccaacatccggagcatccgtattgggaggt
gtgcccggaacacagccaccgcaacaaaattatggacaaggacatcaaccaggagtacta
aatggcaattatcaacaacagttaacgtcttcaatgagtggcctcgccatgaacccttta
aagcaacaaacacctgttcctcctcaaaacaatacgccatatgcaaacgctaacataccc
gatgcgcccatatctgcgccacccactattgctggcgctccagatgcaccaccattgaca
aatggacctccaactggtgggcaatcgcaacagccattgccaagcaataataacaatatt
cctgctgggccatatgctaacgggcaagcttcaaaaacgccacagccacaggtgccacct
tccatgtattccccagcaccaaatgcagcgacaccacccatgcaatctgtaccaggtgga
ccaaatcagatgactgtaaacagcgcaggcttaccaggattgccacacatgccgccagct
aaaccgagtaccggcccgcaattaccaggccaactaccagtttctgcagcgccaccaact
tcagcagctggcgctatgccacaatatcagccaccgggcgcacaacaaataccacctagg
ccaggtcaacttccacaacctggcatccctcagccacaaccacaaccggctgtattacca
ggtcaaccaggtttgccgcctacatcggcggcagcaacgctgccacctcaaccgggcatg
ccaccgatgcctggctatccttcacaaccacaaccgttaggttatccgccactaccacag
caacagcagcagcagccacagcaagcgggttatcctgcacagccgccacaacctggctat
cccccgcagcccggacaaactggttacccgccacaaccgcagcagccgggtttcccacca
caacaacccggctatcctccccaaccacctatgcaaggtggctatgctgggcaaatgatg
ccaccaacacaacccggacagcccccaatgccaggacgtcccggttttaatcaaccacca
gcaccaccgggtaacatgtatcaacagccgcaacagtatcctcaggctcagcgccgtctc
gatcccgatcagatgccaaatccaataagcgttattattgaaaaccagcgtaatgctggt
ggcgcttttgtcaccaatcagccaggtcttttgccgccattggtcactaccaaatatgtg
gtgcaggatcagggtaattcctcgccacgttatgtcagatcctctttgtattgcatccct
gctacgtctgatttattgaaaactacagctttgccatttaccctgctcgtctcaccaatg
gcacgtactgtggagggtgaatatgagcccccaattgttaacttcggtgaattgggacca
attagatgcaatcgttgcaaggcatacatgtcaccaaatatgcagtttgtagatgctgga
cgacgtttccaatgtcttatgtgcaaagtaaccacagaagtgccaactgaatatttccaa
catttggatcacacaggacaacgtgtagacaagtatgaacgtcccgaattagtattgggt
acctatgagtttttggcaacgaaggactattgtcgcaataacacacccccggaaatacct
gctttcgtattcgtgattgatgtctcttacaacaccatcaaatcgggtttagtgcattta
ctttgttcgcaggtcaagcagatattaaaacacctatccgttgatcaggggcaggagaaa
tctaaaatgcgtgtcggttttattacctacaacagtacagtgcacttttataatataaag
agtagcttggcacaacctcaaatgatggtggttggcgatgtacaggacatgtttatgcca
ctacttgacggcttcctttgtcatcctgaagaatccgatgctttaatcgatgctctaatg
gagcaaataccgaaaatgtttgtcgatacaaaagagaccgaaaccgtgttctatccagct
atacaagccggtctggaagcattgaaagcttccaattgtgctggaaaattgttagtcttc
aattcgacacttccaattggtgaaggacgcggaaagttaaagaatcgtgatgatcgtaaa
ttgcttggtactgaaaaggagaaaactgtgcttacgccacagtgtaattcttacaatgca
ttggggcaggagtgtgtacagaatggagtgtcggttgatttattcttatttaataattca
tatattgatattgcaacggtgggtcaagtatcacgactcagtggcggagaggtctacaag
tacacctacttccaagctgacctggatggcaatcgtttgattgaggacatcatcaagaac
gtgtcacgcccaattgcttttgatgctgttatgcgcgtgcgcacttcagccggcatacgt
ccaactgatttctatggtcacttctttatgacaaacacaaccgatgttgaattggctagc
atagactgcaacaaggctattgctattgagattaagcatgatgacaaattgcctcccgag
gagaatatttacttacaaatcgctctactctacacatcggttagtggtcagcgtcgcttg
cgtattttgaatttagcacttcgtgccactactacaattgcggaggtattcaaatgctgc
gatttggatgccatgatgttgttctttgctaaacaagcttgctttaaattgctcgagctc
acaccgaaacaagtcaaggataatctcataaatcgttcagcgcaaatattggcatgctat
cgaaaacattgcacttcaccaacatcagctggtcaacttatactgccagagtgcctgaaa
ttgttgccgctctatgtatcttgtttgatgaaaaatgacgccatctctggtggttccgac
atgacgctcgacgatcgttcttacgtcatgcaatttgtgatgaccatggatttgaatatg
tctgttagctacttgtatccacgtttcattccaattcacaatgtcgatattgatgacaac
gaattgccaatgtcgatacgttgtacacacgaaaagatgagcgaagatggcgcctacata
ctcgaaaacggtgtgcatctctttgtttggctgggtcaatcgtgtccacaaagcttcata
caaccgatattcggtgtgcagtgcacacagcaagtgaatgcagaacgttttgcgattatt
ggtgaaacgccattggctcagcgtgtgcgcaacattatcgatacgattatgaaggaacgt
actaggaacatgagggtaacttgcgtgcgacaaaacgacaaactggaatcggtattccga
catttcctgattgaagatcgcggcacagacggttcacccagctatgttgacttcttatgt
cacatgcataaggagattaaagatttattaagttag
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