Rhagoletis zephyria (snowberry fruit fly): 108358997
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Entry
108358997 CDS
T08513
Name
(RefSeq) syntaxin-18 isoform X1
KO
K08492
syntaxin 18
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04130
SNARE interactions in vesicular transport
rze04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108358997
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108358997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rze04131
]
108358997
Membrane trafficking [BR:
rze04131
]
SNARE
Syntaxin (Qa)
Stx-rER
108358997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
108358997
NCBI-ProteinID:
XP_017466099
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MDITQKFKAGVMTVKLQRKGELPPQPLDKQRILSKSGVGLSVGQRDEFSRQAKDVCHKIT
TLRNVLVENRAAYMRIGQHLKSATHMTDEQRDLIDRESEKFVTFYTQHLAQMRADWKRAK
RKPQQQQHMEAVLDLLERYLRSVQQIYLDQKRYRVQYELETYKLLKLAADKKKIPVRPAG
EHSGRRVIRHSPSSTTDDEDIPDDLRPQKSLSDEALDLQGDWLDDDDFGDNDRGNKKVIN
NAADGKLNGYSYVDKSTKVSGPQLRHRNPHAEDEENIGSGGELKTTQSSQKVALDEDIQK
SQQLEDEAKKLSPEDVQMYEQENVQLYHELQGLVEEVEQIEKNVVDIAQLQDIFTEKVSL
QQHNIERIASAVVGATENVKDANEQIQQAIQRNAGLRVWSLFFLLVMSFALLFLDWYYD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacataacgcaaaaattcaaagccggtgtaatgacagtgaaactgcaacgcaaaggt
gagctcccaccgcagccattggacaaacaacgaattctatccaaaagcggcgttgggctt
tctgtcggacaacgtgacgaattctcacgccaagcaaaggatgtgtgccacaaaataacc
acattgcgtaatgtgctggtggagaatagggcggcgtacatgcgcatcggtcaacacctg
aagagtgcgacacacatgacggacgaacaacgcgacctcatagaccgcgagtcggaaaag
tttgttacattttacacccaacacttggcacaaatgcgtgccgattggaaacgtgcaaaa
agaaaaccacaacagcagcaacatatggaggcggtactagatttattagaacgctatttg
cgcagtgtgcagcaaatctatttggatcaaaaacgttatcgtgtacagtatgagctggaa
acgtataagttattaaaattggcagctgataaaaagaagataccagtgcgtccggctggt
gagcacagtgggcgacgcgtgatacggcactctccaagtagtaccaccgacgatgaagat
attcctgatgatttacgaccacaaaaaagcttgagtgatgaagctttagacttgcaaggt
gattggctagatgatgatgatttcggtgacaacgaccgcggcaacaaaaaagtcattaat
aatgcagccgatggtaagttgaatggttatagttacgttgataaaagcacaaaagtgagt
ggaccgcaattacggcatcgaaatccacatgctgaagatgaagaaaacattggtagcggt
ggcgagctaaagacgacacaatcatcgcaaaaggtggcgctagacgaggacatacaaaaa
tcgcagcaattagaggacgaggctaagaaactttcacccgaagatgtgcaaatgtacgag
caagaaaatgtgcagctatatcacgaattgcaagggttggtggaagaggtggaacagatc
gagaagaatgtggtggacatagcgcagttgcaggatatctttactgaaaaggtctcactt
caacaacacaacatcgaacgcattgccagcgctgtggttggcgcaacagagaacgtcaaa
gacgccaatgaacaaatccagcaagctatacaacgcaatgctggcctacgtgtatggtca
ttgtttttccttttagtaatgtcgtttgccttactcttcctcgactggtattacgattaa
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