Rhagoletis zephyria (snowberry fruit fly): 108359041
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Entry
108359041 CDS
T08513
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03022
Basal transcription factors
rze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108359041
09124 Replication and repair
03420 Nucleotide excision repair
108359041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108359041
03400 DNA repair and recombination proteins [BR:
rze03400
]
108359041
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108359041
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108359041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
XPC-binding
Motif
Other DBs
NCBI-GeneID:
108359041
NCBI-ProteinID:
XP_017466158
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MDKTDEDESNKFSLLAIVLDTNPSQRIVRQNPQLLTQFLDAIIAFGNAHLMQCSQNKLAV
LSCHHHATDFLYPMPGKQLDIRQVDGQYEVFSLVEKTVKQRLSHIITNAPKVNAPCESLL
AGSMAMALCYISRIQRSAAAGVKMHSRILVVTGSNECASQYMTYMNVFFTAQKLGITVDV
CALDKTMSLLQQGCDITGGQYLRLTQLDGLLQYLLWVFLPDPQMRQKLVLPPATKVDYRA
ACFCHRELIDIGYVCSVCLSIFCKFSPICTTCHTVFKIPGPLPSKPKKKKKV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacggatgaggatgaatcaaataaattcagtttgttagctattgtattggac
acaaatccatcccaacgtattgtgcgacaaaacccgcagttgctaactcaattcttggat
gctattattgcttttggcaatgcacatctgatgcaatgctcccaaaataaactagctgtc
ctttcttgtcatcatcatgccacagacttcttatatcctatgccaggaaagcagttggat
attcgtcaggttgatggacaatacgaggtcttcagtttagtagagaagactgtaaagcaa
cgtttaagccatattataaccaatgctccgaaagttaatgcgccttgcgagagtctctta
gcaggcagcatggcaatggctctatgctatatatctagaatacaacgtagtgccgccgca
ggtgttaaaatgcattcacgtattttagttgttacaggcagtaacgaatgcgcctctcag
tacatgacatacatgaacgttttctttacggcacaaaaattaggcattactgttgatgtt
tgtgcattggataagactatgagtctattacaacagggctgcgacattacaggtggtcaa
tatctacgtctaacccagctggatggtttgctgcaatatttactgtgggttttcctaccc
gatccacaaatgcgtcaaaagttggtcctacctcctgcgacgaaggtggactatagggcc
gcatgtttttgccatcgtgaattaattgatattggctacgtttgttcggtgtgcttatca
atattttgcaagttcagtcccatatgcacaacatgccacacggttttcaagatacccggc
ccattgccgtcaaaaccaaaaaagaagaaaaaggtctga
DBGET
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