Rhagoletis zephyria (snowberry fruit fly): 108359468
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Entry
108359468 CDS
T08513
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108359468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rze03400
]
108359468
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
108359468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
108359468
NCBI-ProteinID:
XP_017466834
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MAVNKEYLVAVLDIRPSSSEDLKLKSVKLVADILKDKICAGKKDFVSFVLLGTEKTLNDV
NEHVFPDGYNNITQYQNPQCPTWQLLLNFYKFVNEESCDEGEWLDALVVAMEVLKRGEEC
FKFQRSRILFFYDFNDAPNTYDMYDVIVQNIAQTEVELVVISQNIQYVDNPISGQPKVKF
RDCDKGKQQLKNEDYALQLITDCSAKLYNFEEAKRCVFKITNKRPWVWNSKLTIGSEITI
KISGVIYMKDESNIKLKKCWGQDDELVSREMKSFVRGTEIEPAETELIEGYMLGSTPIPF
DESLKDDGERFEPGLKFVCFMKRESIPEEYFCGDSLYWLVHQKGMIASAQKLDALVRAMI
NTKIAMLCCKVYSIGFNTPKMVVLLPNKLHPDRPASLTMVEIAYHSQYQYFQFPLLRTPK
TESTNEQIDAIDNLIDSMDLSLHSKVSDDPRDTYQPDLLPFGSLPHIYEQNVMDVLERKI
ISNASEDDERFAEMLEDKHFVEIFWKVPELREKNAKCAANAIKSLFPLEENVPQVPTSGK
LKVKSEISNSSASTSTESNLILSFDKVSEEAPAEDFRQLVQYNVLQIRNRTERDAKFQVY
AQQMRNVIWALLFESKGSVNYKKMEEALTIYRKKCYDFNSFDDYNKWIREVKEKVLQNEL
QDFWQNVIVKNDLGLCFVRTDSLESKRSLDKFYELHSYETAEQL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaataaggagtatcttgtagctgtcctggacattcgcccatcctccagtgaa
gatttaaaattaaaatcagtaaagttagttgcagatattttgaaagacaagatctgcgct
ggcaaaaaggacttcgtatcatttgtgctgcttggtacagaaaaaacattgaatgatgta
aatgagcacgtttttccggatggttataataacataacacagtatcagaatccacaatgt
cctacttggcaattgcttttaaatttctataaatttgtcaacgaagaatcctgtgatgag
ggtgaatggctggatgcattggtagtcgcaatggaagtgttaaaaaggggcgaagaatgc
ttcaagtttcaaagatctcgaattttgttcttttatgatttcaatgatgcaccaaatacg
tatgatatgtatgacgttatcgtacaaaatatagcgcaaacagaagtcgaactagttgtt
atttctcaaaacattcaatacgtcgataatccaatcagcggtcagcccaaagtaaaattt
cgtgattgcgataagggtaaacaacaacttaaaaatgaggattatgccttacaactcatt
acagactgcagcgcaaagctttataatttcgaagaagcaaagcgttgtgtattcaaaata
actaacaaaaggccatgggtttggaacagcaagttaacgattggatcagaaatcacaatt
aagatatctggagttatttacatgaaagacgaaagtaatataaaattaaaaaagtgttgg
ggtcaagacgatgagctcgtttcgcgtgaaatgaaatcttttgttcgtggcacggaaatc
gaaccagccgaaactgagctaatcgaaggctacatgttaggttccacacctattccattt
gacgaatcgctgaaagatgatggagaacgttttgaaccaggtttgaaattcgtctgtttt
atgaaacgtgaatctatacccgaagaatatttctgtggcgattcattatactggcttgtg
catcaaaaagggatgatcgcgtcggcacagaaacttgacgcgttagtacgtgccatgatc
aatacaaaaatcgcgatgctctgctgcaaagtgtacagcatcggattcaatacaccgaag
atggtggtactattgccaaataagctacatcccgatagaccagcatcactaaccatggtc
gagattgcttatcattcccaatatcaatactttcaatttccactgctaaggactccaaaa
acagaatccacgaatgagcaaatcgatgctatagataatttgattgattcaatggaccta
tcattgcattccaaagtgtctgatgatccccgtgacacataccagcctgatttgcttcct
ttcggttcattaccacacatttacgagcagaatgttatggatgttttagagaggaagata
atatcaaatgccagcgaagacgatgaaaggttcgctgaaatgttagaggataaacatttt
gtagaaatattctggaaagtaccggaacttcgagaaaagaatgcaaagtgcgcggctaac
gccataaagtcgttgtttccgctagaggaaaatgtgcctcaggttccaacaagcggaaaa
ctaaaagtgaaatcggaaatcagtaatagttctgcgagcacttcgacagagagcaattta
attctgtcgttcgataaagttagtgaggaggcacctgccgaagatttccgccaacttgtt
caatacaatgttttacaaatacggaatcgaacagaacgagatgcgaagtttcaagtgtat
gcacaacaaatgcgcaacgttatttgggcgctcttgtttgaaagcaaaggcagcgtaaat
tataaaaaaatggaagaagcgttaacaatctatcgtaagaagtgctatgactttaattca
tttgatgattacaataagtggataagggaagtaaaagaaaaagtgctgcaaaatgagctt
caagatttttggcagaatgtaattgttaaaaatgatttagggctttgttttgttaggaca
gattcattagagagtaagcgctcacttgataaattttatgaattacatagctacgaaacg
gctgaacaactttag
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