Rhagoletis zephyria (snowberry fruit fly): 108359678
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Entry
108359678 CDS
T08513
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108359678
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rze04990
]
108359678
Domain-containing proteins not elsewhere classified [BR:
rze04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
108359678
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
108359678
NCBI-ProteinID:
XP_017467125
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MWLNSSWKMMRLTGLLRLCLYIILISALVGADITTVERIRKHQEWLKQRNQQKSNRLAVA
INYPKSNYERANLWRHPKQSAASTENLSINEVYPENEANENEDLTSTTTTPTISTLLVTT
TIPLETTPSRPTSQPEEQTVLSATSNTIAVTWASPTTQRATTESRPRQISEQSVGVPEAP
IISSEAVTKAPKISVPKTTTLGTTSTTTELTLSSSTSKPNVVENSDLATNVSSVLPTTKR
EHSSSRQRAYPRWGNWGKWSECSRSCGGGVSFQQRKCINRNSATGKRYISNACIGVYKRY
HICNEQPCPAALTDFRAVQCAAFNEVDFQGQKYTWEPYIKEDAECELNCKPMGMKYFATL
NSSVIDGTPCFRPAEYYRSNYRQRAMCVDGVCKAVHATGIITGLSANSGSVNCGGLICRP
ITGIFTRDPLPQDAYVHVATIPAGASNISITELGNSINLLVLRSPDQKYIFNGDNMASDS
GAYEALGAIFDYHRIDGLQQGEGVTEWITCLGPIRDMLELMIYSKSSNPGIKYEYLLPIT
SDSEENELSVESEAFLKNGPEESFASNSRSGRRRRFNWKVVGFSACSKTCGGGIQTPIVR
CVRENPIRYYSQRRCMHSEKPMLNENLLRCNTQPCPAYWRIEDWSECHCQQGEGYRERDI
SCVQELASGIVIHVDNSACIEEMPNQRKPCDCPKNRRRSHVARYRMAHAGSNGTHNHRGR
DKTDKSGIWLMSDWNQFCSVECGTGVEYRTIFCDRSKPNTDRCDPRTTPEITHPCQRDRD
CEKGEWFAGPWTSCNGNCFNLTRSRPVYCIHNREIVTDEDCKPELKPQLVENCLHEEVEY
CGPRWHYSEWSECTKTCDGGTQRRSVKCLEYDERESSMRESSKCRYSLREPIYRSCNTHK
CEEPQLELLQNDVAVSCVDEFNNCQWAVKAKLCSYDYYKQNCCYSCGAV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaacagtagctggaagatgatgcgtctaacgggattgttgagattatgtctc
tatataatattgataagcgcattggttggagcggatataacgactgtcgaacggatacgg
aaacaccaagaatggctaaaacaacgaaatcaacagaaaagcaatcggctcgcggtggct
atcaattatccgaaatccaactacgaacgtgccaatttatggcgtcatcccaagcaaagc
gcagcatctacagaaaatctaagcataaacgaagtttatccagaaaatgaagctaacgaa
aatgaggatctaacatcaaccacaaccacgccgacaatctcgacattgttggtaacaacc
acaataccattagaaacaacaccatctcgacccacgtcacagcccgaagaacaaacagta
ttatcggctacgtccaacacaatcgcggttacgtgggcttctccaacaacacagcgcgcg
acaacagagtcgcggcctaggcagatatctgagcagagtgtgggtgtgcccgaagcgcct
attattagtagtgaggctgtaacgaaagcacctaaaatcagtgttccgaagacgactacg
ttaggaacaacaagtacaacaacagaattgacgttaagcagctcgactagcaagccaaat
gttgttgaaaattcagatttggcaacaaacgtaagctcagtattacctacgacaaagcga
gagcactcgagttcacgccagcgtgcctatccacgttggggtaattggggcaagtggagt
gaatgctcgcgcagttgtggcggtggtgtaagctttcagcagcggaaatgtataaatcgc
aactccgcaactggaaaacgttatatcagtaatgcttgcattggcgtctacaagcgttat
cacatctgcaacgagcagccttgtcctgccgctttgactgacttccgcgccgtacaatgt
gcagcattcaatgaggtcgattttcagggacagaaatacacttgggagccctatatcaaa
gaggatgccgaatgcgaattgaattgcaagccaatgggtatgaaatattttgcaacgtta
aactcatcggtcattgatggtacgccatgttttcgaccagctgaatattatcgctcaaat
tatcgacagcgtgcaatgtgtgtggatggtgtttgtaaggccgttcacgcaacaggcatc
atcacgggactctctgccaatagtggctcggtcaactgtggcggtttgatttgccgccca
ataacgggtatctttacacgcgatccgctgccacaagatgcttacgtgcatgtagccaca
ataccagccggtgcctcgaatatttctataactgaactggggaacagcataaatttacta
gtgctgcgctcacctgatcagaaatatatattcaatggcgataatatggcatcggatagt
ggcgcctatgaggctttgggcgcaattttcgactatcatcgtatcgatggattgcagcag
ggcgaaggcgtaacagagtggataacttgcttaggccccataagagacatgctggagttg
atgatctacagcaagtcctcgaatccgggcatcaaatatgagtatctcctgcctataacc
tccgattcagaagaaaatgaactatccgtagagagtgaagcatttttgaaaaatggtcca
gaagaaagttttgctagcaattcgcgctcgggtcgacgtcgccgcttcaattggaaagtg
gtaggttttagcgcctgttctaagacttgcggtggtggcatacagacaccaattgtacgc
tgcgtacgggagaatccaatacgttattattcacaacgccgttgcatgcattccgagaag
ccgatgctgaatgaaaatctcctgcgttgcaacactcaaccatgtcctgcctattggcgc
atagaagactggagtgagtgtcattgccaacagggtgagggctatcgtgaacgcgatata
agttgtgtgcaagagctcgcttcaggcattgttattcacgtagacaattcagcttgcatc
gaagaaatgccaaaccagcgtaaaccatgcgattgcccgaagaataggcgtcgctcacat
gtggcacgctaccgcatggcgcacgctggatccaatggcacacataatcaccgtgggcgc
gataagactgacaagtccggtatttggctaatgtccgattggaatcaattttgctcagtg
gaatgcggtacaggcgtagaatatcgcacgatcttctgtgatcgttccaaaccgaacacg
gatcgctgtgatccacgtacaacgcctgagattacgcacccatgccaacgtgatcgtgat
tgtgagaagggtgaatggttcgctggaccgtggacatcgtgcaatggtaattgttttaat
ttaacacgatcgcgtcccgtctattgcatacacaatcgggaaattgtgacggatgaggac
tgtaaacctgagttgaagccgcaattggtggaaaactgtctacacgaagaagtggagtac
tgcggaccgcgttggcattactccgaatggtcggagtgtacgaaaacatgcgatggtggt
acccagcgacgttcagtaaagtgcttggagtacgatgaacgcgagagttcaatgcgtgaa
tcttcaaagtgtcgctactcattgcgcgagcctatctaccgcagttgcaacacgcacaag
tgtgaagaaccacagttagagctcctgcaaaatgacgttgctgtctcctgtgtggacgag
tttaacaattgccagtgggctgtcaaggcgaaactctgcagttacgattattacaagcaa
aattgttgttactcctgtggtgcggtctaa
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