Rhagoletis zephyria (snowberry fruit fly): 108359686
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Entry
108359686 CDS
T08513
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108359686
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108359686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108359686
04121 Ubiquitin system [BR:
rze04121
]
108359686
03400 DNA repair and recombination proteins [BR:
rze03400
]
108359686
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108359686
Spliceosome [BR:
rze03041
]
Complex B
Other components
Prp19 complex
108359686
Complex C
Prp19-CDC5 complex
108359686
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
U-box type E3
108359686
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
108359686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT122_1st
U-box
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_like
Cytochrom_D1
zf-Nse
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
108359686
NCBI-ProteinID:
XP_017467137
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSLVCAITNEVPDTPVISPISGAIFEKRIIEKYILENGCDPITGKELKVEELIEIKTPPI
VKPKPPSATSIPATLKTMQDEWDALMLHSFTQRQQLQTARQELSHALYQHDAACRVISRL
NKEVAAAREALATLKPQAGIGASTAPTSIPQPAIAAEAAGNATQPIEQAGMSAEVIQKLQ
DKATVLTQERKKRGRTVPEELCTQEQIKTFMTVASHPGLHSASIPGILALDINSADHSKI
LTGGNDKNATVFNKDTEQVVAILKGHTKKITKVIYHPDEDTVITGSPDMSIRIWHVPTSQ
TQLLLRCHDGPVTGLSLHPTGDYILSTSSDKHWAFSDIRTGRLLTKVIDTAEVGLTTAQF
HPDGLIFGTGTDDSQVKIWDLKEQSNVANFPGHTGPISAISFSENGYYLATAADDACVKL
WDLRKLKNFKTIQLEDGYEVKDLCFDQSGTYLAIAGTDVRIHLCKQWQDLKVFNDHTALA
TGVRFGKHAQYLASTSMDRTLKLYAIE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagtctgtgcaattacaaatgaagtgccagatacacccgttatctcgcccatc
tctggtgcaatattcgagaaacgcatcattgaaaagtatatactcgagaatggctgcgac
ccaatcaccggcaaagagctgaaagttgaagagttgattgagataaaaacgccgccaata
gtgaaaccaaaaccgccaagtgccacaagtatcccagccactttgaagacgatgcaggat
gaatgggacgcattaatgctgcactcattcacacaacgacaacaactacaaacagcgcgg
caggaattatcgcacgcattgtatcaacacgatgcagcctgtcgtgtaatttcacgttta
aataaagaagtcgcagcagcacgtgaagccttggctacactaaaaccgcaggccggtatt
ggagcctcaactgcaccaacgtcaataccccaaccagctattgcagctgaggcggctggc
aatgccacgcaaccgattgagcaagctggcatgagtgccgaagttatacaaaaactacaa
gacaaagctactgtattgacgcaggaacgcaagaagcgtggccgcacagtgccagaggaa
ttatgtacacaggagcagattaaaacgtttatgactgtggcttctcatcccggcttgcat
tcagcatccataccgggtattttagcattggatattaatagtgccgatcatagtaagatt
ttgactggtggaaatgataaaaatgcgacagtattcaataaggatacagaacaagttgta
gctatacttaaggggcacacaaagaagattaccaaagtcatctatcatcccgatgaagat
accgtaattaccggttcgcccgatatgtcaatacgcatatggcatgtgccaacatcgcag
actcagttgctattgcgttgtcatgatgggccggttacaggcttgtcactccatcccact
ggcgattacatactatccacatcatcagacaaacattgggctttctcagacatacgtact
ggacgtttattgacaaaggtaattgataccgcagaggtaggtttaacgacagcacagttc
catcctgatggtttgatttttggcactggaactgacgactcacaagttaagatttgggat
ttgaaagaacaaagtaatgttgcaaatttcccaggacatacaggaccgatatcagctata
agtttttcggaaaacggttactatttggccactgcggcggatgatgcctgcgttaagcta
tgggatttacgtaaattgaagaacttcaagacaatacagttggaggatggatatgaagtt
aaggatctatgttttgaccaaagtggtacctacttagccattgcaggcacagatgtgaga
atccacctatgcaagcaatggcaggacttgaaggtgttcaatgaccacacggcactagcc
acgggtgtacgcttcgggaaacatgcgcaatatttggcatcgacaagcatggatcgtact
ctaaaactctatgccattgaataa
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