Rhagoletis zephyria (snowberry fruit fly): 108359724
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Entry
108359724 CDS
T08513
Name
(RefSeq) nuclear pore complex protein Nup155
KO
K14312
nuclear pore complex protein Nup155
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108359724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108359724
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108359724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
DAHP_synth_1
Toprim
Motif
Other DBs
NCBI-GeneID:
108359724
NCBI-ProteinID:
XP_017467182
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MPSISPTDFLDVAGNILERMDIRDSSAPGLLDVKINLTGVAQHGFATASGLNDYDYQNLS
SLSMGPKSAMQVHTVNKIPIPAEILEHFKHIKCHCMMGLFPEIGRAWLTIDSEIYIWTYE
QARDVAYYDGLNHLIVSVGLAKPKPGVFISDVKYLLILTTPIEIIVLGVTFADTTKIISS
PMRNMQSTTTFEEMQLMNKPIFILNSDNVAINVVQCSQNGRIFLGGRDGCLYEIDYHADS
SWFGKRCKKVNHSQSVVSAMVPNFLKLFTENDPIVSIVIDDHRQLLYTLTEKGSIDAWNI
GTDCSSTRRFARVSQNEVMQRASSILKTVDNSIFSKIKSICPLSIDDSLNLNLLAITQSG
VRLFFATRPLSSAQNPSQQHLQQQQIQLSQTLQKQTSTNFPSTNTSGLVSAQSAQDLSKP
QGLYLYHVRLPPGYTPNTTVNKPKQVHSAYYSEGTLLLISTSQQDQDHLWSISSAPFLSR
PYLAEATAVLSLDGIVWSLAEVRDKCESKLNSILRKAKKAKKVVLLTNQGAHIIALLKPV
DILQQLLTAYSGPHNEAVKAFFQIQTESEACTTSLLIACADQFRNTDLAIWAAQALLLYG
GEPYYHYQMLANAQGGTSKINPMNPALHMGHYGVDRNTPQMFVSTPMPHTAGGGFQMPRS
PQSSHTMQQTQYPLSPIPGQDTGYDGGLIVNDYSTVIYSAKHDGLYLYVARLLRPIWKKR
CVDTNLCSTVTQSDCTLILEDLFSLRAFMDAYIVNDCSGLSRNTYSTQTSVSNGFSHVLP
AHTQLSTHEQRNVTEQAQSEEKQSLSALYQLIKHVCEILSLWKILSEHQFQVLATQLTKE
EQTTLSSCTFRDLTLTRTDSCALLIATLINSYLKDNASVSIISAKLREVCPNLYRHEDAV
TFKATEILLSAKSCEASEGKNEKLCTALQLCKDAAPNLPLQNICQQFSIAGFGEGVIELT
ATCAAKIDPEENGIRYYNCDEPTEDTEGYAAYSARMTCYKEVRLMLDTIYQNYCNANETQ
EFEFQRQICDTSEKRFSVQIRKLVNLAIQIKDPLLHITLYQWLMAHDMISELLALPEPSL
GEFLRRNVVNNPGNLNLVDLLWKYYEKNGRHAEAAHILDNLASTESECILLDQRIEYLAR
AVMCLRNDSSGFSIANGVLLKELEDKLEIARVQKCILDTFSAYIAPDHRVLQAIEKLNFT
LYDITQLYQQFADPFDLWECKLTILNCSHHNDPLLIETVWSQIINKAVVGKGTTQERCTR
LFTKIESLVKEFRESGHCFPLAFIIRELELKACQLQFPEGIVPEKLVAMNIDIELLMEYY
FRMISMNERVWANEGNEWHLVQSSIRVVTLLCGNLRSIWHRSKRRILGKAQDIVSTCLSF
CYQKPDTEHLRSSLKSLQCQLQDNLL
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaatcagtcccaccgatttcttggatgtagctggtaacatactggagcgaatg
gacataagggacagttcagcgccggggctgctcgacgtgaaaataaacctcactggagtg
gctcagcatggtttcgcgacagctagtggattgaatgattatgattaccaaaatctttcc
agtttatcaatgggtcctaaatctgcgatgcaagtgcacactgtcaacaaaattccgata
ccagctgaaattttagaacatttcaagcacataaaatgccattgcatgatgggtttgttc
cccgaaattggtagagcatggttaactatcgactctgaaatttatatttggacctacgaa
caagcacgcgatgttgcatattacgacggactaaatcatttaattgttagcgtgggtttg
gccaagccaaaacctggcgtattcataagcgacgtaaaatatttgctaattttgacgacg
ccaattgaaattattgttttgggggtaacgtttgctgataccaccaaaattatttcatcg
ccaatgagaaatatgcaaagcacaaccactttcgaggaaatgcaattaatgaataagccg
attttcatattgaattctgataatgttgctattaatgttgtgcagtgcagccaaaatggt
cgaattttcctaggtggacgagacggttgtctttatgaaatcgattatcatgcagattct
agttggttcggaaagcgttgcaaaaaagtaaatcactctcaaagtgttgtatccgccatg
gttcctaacttcctaaaacttttcactgaaaacgatccaatagttagtatcgttatcgat
gaccacagacaacttttatatacgctaacggagaaaggttccatagatgcatggaatatt
ggcacggattgcagcagtactcgacggtttgcacgagtttctcagaacgaagttatgcaa
cgtgcgagcagtatattgaaaaccgttgacaactccatattttcaaaaatcaaatcgata
tgtccgttatctattgatgacagtttaaacttaaatctacttgctattacacaaagtggt
gttcgattattttttgctactagaccactgagttcagcacagaatcctagccagcagcat
cttcaacaacaacaaatacagttgtcccaaacgctacagaaacagacgtctaccaacttc
ccctctaccaatacctcaggcttagtttcggcacaatcagctcaagaccttagcaaaccc
cagggactatatttatatcacgttcgtcttcctccaggctacacacctaacacaaccgtt
aataagccaaaacaggtccactctgcatactatagtgaaggaacattgctattaatttct
acatcgcaacaagatcaagatcatttatggtcaataagttcagcaccatttctaagtcgt
ccgtacttagcagaagcaacagcggtacttagcttagatggaatcgtttggagtttagct
gaagtacgagacaaatgtgaatctaaattgaactcgattttgcgtaaggccaagaaagct
aaaaaagtagtgttactcacgaatcaaggcgctcatattattgcattgttaaaaccagtg
gatatactgcagcagctgcttacagcctacagtggccctcataatgaagctgtcaaagca
ttctttcaaattcaaacggagagcgaggcttgtactacttcgttacttatcgcatgtgca
gaccaatttcgcaatacggatctggcaatatgggccgcacaagcgctactcctatacgga
ggagagccttattatcactatcaaatgcttgcgaatgctcagggaggaacttctaagatt
aaccccatgaacccagctttacatatgggacactatggtgttgaccgcaacacaccgcaa
atgtttgtgtctacaccaatgccccatactgctggtggcggttttcaaatgccgcgctcg
ccacagtcatcacatacaatgcaacagacacagtacccgttgagtccaataccaggccaa
gatacaggatacgatggtggtttaattgttaacgactactctacagtcatatattcagcc
aaacatgatggattgtacttgtacgttgcccgactactgcgtccaatttggaaaaaacgt
tgtgttgacacaaatttatgcagcacggttacccagtccgattgtacattgatacttgaa
gacttattttcgctgagggctttcatggatgcatacatcgtaaatgactgttccggatta
tcacgaaatacgtactctactcaaacaagcgtatcaaatggatttagtcatgtgctcccg
gctcacactcagctatctacgcacgaacaacgaaatgttactgagcaagcacaatcggaa
gaaaaacaatctttaagcgctttatatcaattgattaaacatgtttgcgagatcttatcc
ctttggaaaatcctgtcggagcatcagtttcaagtgttggcaactcaattaacaaaagag
gagcaaaccacattgagctcatgtacatttcgagacctcacactcacacgcactgattcc
tgtgctttattaatagctactctaattaattcatatctgaaagataacgcaagtgttagt
attatttcggcgaaactgagggaagtttgtccgaacctatatcgccacgaagatgcggtt
acttttaaagctacggaaatattgctttcagccaaaagttgtgaggcttctgaagggaag
aatgagaagctttgcacagctctgcagctctgcaaagatgccgcaccgaatttgccccta
caaaacatttgccaacaattttctattgccggttttggcgaaggggtcatagaattaact
gcaacttgtgcagctaaaatcgatcccgaagaaaatggtatacgttactacaattgcgat
gagcctaccgaagacactgaaggttatgccgcttattctgcacgtatgacatgttacaag
gaggtccgcttgatgttggatacgatatatcagaattattgtaacgccaatgaaacgcag
gaatttgagtttcaacgacaaatttgtgataccagcgaaaaaagatttagtgttcaaata
cgcaagcttgtaaatttggccatccaaattaaagatccactcctgcatatcacattgtat
cagtggttgatggcacatgatatgatatcggagttgctggcattacccgaaccaagtttg
ggagaatttctacgtcgaaatgtggtaaacaatccaggaaatttaaatttagtcgactta
ttgtggaaatactatgagaaaaatggccgacatgccgaagccgcgcatatcttggacaac
ttagccagcactgaaagcgaatgcattcttcttgaccaacgcattgaatatctagctaga
gccgttatgtgtttgcgcaatgatagttcgggcttttccattgccaatggtgtcttgcta
aaagagctagaggataagctggaaatcgcacgtgtacaaaagtgcatactggatactttt
tcggcatatatagcaccggatcacagagtattgcaagcgatagaaaagcttaatttcacg
ttgtatgatataactcaactctatcagcaattcgccgatccctttgatttgtgggagtgt
aaactaactattctgaattgttcacatcacaacgatccgttgttaatcgaaacagtttgg
agtcaaatcataaataaggctgtggtgggtaaggggacaacacaagagcgatgcacgcgc
ttgttcaccaaaatagaatcgttggtaaaagagtttcgtgagtcaggccattgcttccca
ttggcatttattatacgtgagctcgaattgaaagcttgccaacttcaatttcccgaagga
attgtgcccgagaagctagttgcaatgaatatagatattgaacttctaatggagtattat
ttcagaatgatttcaatgaatgaacgtgtttgggcaaatgaaggcaatgagtggcatctt
gtgcaatcatctatacgtgtagtaactttactatgtgggaacttgcgttccatatggcat
agatccaaaaggcgcattcttggaaaggcacaggacatcgtatcgacttgtttaagtttc
tgttatcaaaagcccgatactgagcacctgcgcagctcattaaaatcgctacaatgccaa
ttacaagataatttgttgtga
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