Rhagoletis zephyria (snowberry fruit fly): 108359960
Help
Entry
108359960 CDS
T08513
Name
(RefSeq) protein Gawky isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108359960
03036 Chromosome and associated proteins [BR:
rze03036
]
108359960
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108359960
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108359960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
M_domain
UBA
RRM_1
RRM_occluded
UBA_7
UBA_DHX29
Med9
Motif
Other DBs
NCBI-GeneID:
108359960
NCBI-ProteinID:
XP_017467540
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MREALFSQDGWGCQHVNQDTNWEVPSSPEPTNKDPSGAPTMWKPTINNGTDLWELNLRNG
GQPPTQPVQKTPWGHTPSSNLGGTWGEDDDGADSSSVWTGSSNNPTSAGAVGVAGVSSTG
VAANVPVNGPQWGQSSVGVGVGTSGNAAGAPSVNIGSVSAVGSATGGPGVNVTGSVNSVS
ASGSAGNNWSDSREMSSGTVSGVIAMRGVDPRDQIRGTSAAEPRDLRMLDPRDPIRGDPR
GISGRLNGTSEMWGQHHSMTHNQIPAMNKIVGPGGVGAGVSTGAVVAGAGVAGIGPGGVN
AINPGGVSGNVNAHWGASSAVVGPKDITSMAGKVTGWEEPSPPPQRRNIPNYDDGTSLWG
QQSRVSGGGSSHWKDISDPMNRHLTRNAVGNQNTTNTVAGLGSGAGNGLGGNQGVLNAPV
VGGNTNNPISSVGPQGRLGSGVGPGAGVNQHKPDNTMWVHASNPNVNARNAAAWGDETNH
NVGPNSGVNWMDDKTNAGIGQLGVSVGGANSWNDPPASWNKSQNKMPVGAAGWGAATGND
GTDLSTDWNGHGGIVGKTQQKIGSVNVNIGNLNTDVIKQSKQYRVLVENGFKKEDVERAL
INANMNIEEAADLLRANATMAMDWRRHEETLGSYGDHPNPGSFPGRYPPTATQPTMPFPP
NILNNMSGNAVSASGNNSNLAALNSLQPLPVQKYLNSAPHNVASGPQTMNPAVAFGQGVA
NVTAAVNAASNSNSQPSAQQLRVLVQQIQLAVHSGYLSSQILSEPLPSSMLVLLYQLLTN
IKHLQAAQQSLTRGGNNANNSQISYAIAKYKQQIQNLQNQINAQQAFILKQKQQSMPQNT
QQHPAAHANSSNLEYIRGQHDAISALQGNFSEMNLSKHSGYPGGPNSQSKLINQWKLPEK
DMTSESTDFSRAPGATKQNLSSAPGNTMGPLGLQNDGTWSTGRSIGDGWPDSSTETENKD
WSVAQPTPAATYTDLVQEFEPGKPWKGSQIKSIEDDPSITPGSVARSPLSINSTPKEADI
FANPSKSSPTDLTPLSLSSSTWSFNPSSSNQNFQSPQQCAPSELWATSMNKTSRGPPPGL
GSSKGAGVSVTGVPSVTNSSVVAGSSNGWVVTGGRGVPNSTSGWNTANSGWNSTWLLLKN
LTAQIDGSTLRTLCMQHGPLANFHLYLNQGIALCKYATREEANKAQMTLNNCVLGSTTIC
AESPSENEVQSILQHLPQTSNTVSGCGLIGNGGNGANNASNSGVSVSGGNGSISSSSGNN
NVGPCGSVGGVSGGNVNGSMATHSVASGSGGNNGCGSNAMNSGSTGGNGNGSNSQNQPVS
GACSSNSGKNGNSNNITSGNGSSNATSNSVVGSNNAVAAPAWRQTQNPQNQPRPSGRDEY
DYISKFVCSIVDD
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagcgcttttttctcaggatggctggggatgccagcatgttaatcaggatacg
aactgggaagtgcctagttcacctgagccaacaaacaaggacccatctggagcaccaaca
atgtggaaaccaactataaataatggcactgacctgtgggaattaaatttaagaaacggt
ggccagccaccaactcagccagttcaaaaaacaccgtggggtcatacaccatcgtctaat
ttaggtggaacatggggagaagatgatgatggcgcggacagtagcagtgtttggactggt
tcatcaaataatcctacatctgcaggtgctgtcggcgtagctggagtcagttcgacggga
gttgccgctaatgttcctgtgaacggaccacaatggggtcaaagctctgtaggtgttggc
gtaggcacatctggaaatgctgctggggcgccatctgtgaacataggcagtgtgtctgcc
gtaggtagtgctactggtggccctggcgtgaatgttactggtagcgtaaattcagtctca
gctagtggctcagctggtaataattggagcgattctcgtgaaatgagcagtggtacagta
agcggcgtaatagcaatgcgcggagttgacccacgtgatcaaattcggggcacctcagct
gccgagccgcgtgatttacgcatgttagatccacgtgatccgattcgtggtgatcctcga
gggatttcgggacgtttaaatggaacatcggaaatgtggggacaacaccattccatgaca
cataatcaaatacctgcaatgaacaaaatagtggggcccggtggagtaggtgccggcgtg
tccactggtgctgtagttgctggtgcaggcgtagctggcatcggacccggcggtgtcaac
gctataaatcctggcggcgttagcggtaatgtaaatgctcattggggcgcatcttcagcg
gttgttggaccaaaagatattacttcaatggcaggtaaagtcactggatgggaggaacca
tcgcccccaccacagcgacgaaatatacctaactatgacgatggaacatctttatgggga
caacagtcacgtgtatctggcggaggtagttctcattggaaggatatttctgatccaatg
aacaggcatttaactcgaaacgctgtaggtaaccaaaataccacaaatacggtggctggt
cttggcagcggagctggaaatggactaggcggcaatcagggtgtactaaatgcgccagtc
gttggtggtaatacaaataatcccattagcagtgttggtccccaaggccggcttggttca
ggtgttggtcccggtgctggcgtcaatcagcataaacctgataatactatgtgggtgcat
gcgagcaatccgaatgtgaatgctcgtaatgctgccgcgtggggtgatgagaccaaccat
aatgtgggccctaattccggcgtaaactggatggatgacaaaactaacgctggtattgga
caactaggcgtcagtgtaggtggtgctaattcttggaatgatcctcctgcatcttggaat
aaaagtcaaaacaaaatgcctgttggtgccgcagggtggggtgcggcaacaggaaatgac
ggaaccgatttgtcaacagattggaatgggcacggcggcattgtaggcaaaacccaacag
aaaatagggagtgttaacgttaacattggtaacctgaacactgacgtgatcaaacagagt
aaacaataccgagtacttgttgaaaatggctttaaaaaagaggacgtggaacgagctcta
ataaacgccaatatgaacatcgaagaagctgcagacctcctccgggctaatgctacaatg
gcgatggattggagaagacacgaagaaactttgggttcctatggtgatcaccctaatcct
ggtagctttccagggcgctaccctccaacggccactcagcctactatgccattccctccg
aacattttaaataatatgagcggcaacgctgttagtgccagcggtaataattcaaacctg
gcagcgctcaattcactacaaccacttccagtgcaaaagtatctgaattcagcaccacat
aatgttgcaagtggaccgcagactatgaatcctgccgtcgcatttggacagggggttgct
aatgttactgcggctgtaaatgcggcttcgaatagtaacagccaaccatctgctcaacaa
ctacgtgttcttgttcagcaaatacaattagctgtgcatagtggttacttatccagccaa
attttatcagagcctttgccatcctcaatgctcgtacttttgtatcaattattaacaaac
ataaaacacctccaagcggcacagcagtccttgacacgtggtggcaacaatgccaataac
tcacaaattagttatgctatcgccaaatataagcagcaaatccaaaatttacaaaatcaa
ataaacgcacaacaagcgttcatactaaagcaaaagcagcagtccatgccacaaaacaca
caacagcatcctgcagcacatgccaacagttctaacctggagtatattaggggacagcat
gatgccataagtgctttgcaaggcaatttttcagaaatgaacttgtctaagcatagtggt
tatccaggtggtccaaattcacagtcaaagcttataaatcagtggaaacttccagaaaag
gatatgacatctgaaagcacagatttttctcgggcaccaggagcaaccaaacaaaactta
tctagcgctcctggaaatactatgggccccctgggtctacaaaatgatggcacttggtca
actggacgaagtattggtgacggttggccagactcatccactgaaactgagaataaagac
tggtccgttgcacaacctacgcctgcagcgacttacaccgatttagttcaagaatttgaa
ccaggaaagccatggaagggctcccagattaaaagtatagaagacgatcctagtataact
cccggcagtgtagctagatctccgttgtctattaattcgacgccaaaagaagctgatatt
tttgcaaatcctagcaaaagttcaccgactgatttaacaccgctaagtttatcctcatcc
acatggagctttaatccatcatcaagcaatcaaaactttcaaagtccacaacaatgtgcc
ccgtcggaattatgggcaacttcaatgaacaagacttctcgaggtccaccaccaggctta
ggttcaagcaaaggtgcaggcgtatcggtaactggcgtaccatccgtaacaaattcctcg
gtagttgctggcagttcaaatggatgggttgttacaggcggccgtggagttcccaatagc
acttctggttggaatacagcaaattcgggatggaactccacatggctattactcaaaaat
ttgaccgcacagattgatggctcaactttacgtaccttatgcatgcagcatggcccactt
gcaaattttcatttatatttaaatcaaggaattgccttatgtaaatatgcaactcgcgaa
gaagcaaacaaagcccaaatgacattaaataactgtgttctcggtagcactaccatttgt
gcagagtcgccgagtgaaaatgaagttcaaagtattttacaacatttgccacagacgtct
aacactgtttcgggatgtggtttaataggaaacggaggcaatggggcgaacaatgcttca
aatagtggcgtaagtgttagtggtggaaatggttccatatcgtctagcagtggtaataac
aatgtaggaccctgtggtagtgttggtggtgtaagcggtggtaatgttaacggcagcatg
gccacccattcagtagcgagcggctcaggtggtaataatggttgcggaagcaatgcaatg
aacagtggaagcactgggggcaacggcaacggcagcaatagtcaaaatcaacctgtttct
ggtgcttgcagctcaaacagtggcaaaaacggaaatagtaataatattactagtggtaac
ggtagttcaaatgccacttcaaatagtgttgtcggaagtaataacgctgtggctgcacct
gcatggcgtcaaacacaaaatccacaaaatcagccaagaccatctggtagggatgaatat
gattatatttccaagtttgtttgctccattgtagatgattaa
DBGET
integrated database retrieval system
