Rhagoletis zephyria (snowberry fruit fly): 108360317
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Entry
108360317 CDS
T08513
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108360317
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
108360317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_14
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_16
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
DUF7017
Motif
Other DBs
NCBI-GeneID:
108360317
NCBI-ProteinID:
XP_017468041
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MAAPIEIPLRDTDEVIEVHPDQLPECQEVLAILRQERSQLSTWVNVALAYYKERRTADFI
RLLETARAEGNTDYRDMEKDQMRAYDMLAAHYVQEANREKSKEKKRELFMKATNLYTTAD
KIIMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPANIPSLLGKACIAFNKKDYRG
ALAFYKKALRTNPNCPANVRMGMGHCFLKMNNQEKAKQAFERALELDNNCVGALIGLAIL
KLNLHEPDSNKLGVQMLSRAYTIDSTSPMVLNHLANHFFFKKDYQKVQHLALHAFHNTEN
EAMRAESCYQLARSFHAQCDYDQAFQYYYQSTQIAPANFVLPHYGLGQMYIYRGDTENAA
QCFEKVLKIQPGNYETMKILGSLYANSNSQAKRDMAKSHLKKVTEQFPDDVEAWIELAQI
LEQNDLQASLNAYATASNILLEKVKVEIPAEILNNVAALHYRVGNLTLAKQKLNEAIQRA
KIEAQNSNADKQYYDSISVTMTYNLARLNEAMCSFDVADKLFKDILKEHPNYIDCYLRLG
CMARDKGLIFVASDFFKDALNINNDNPDARSLLGNLHLAKMQFALGQKNFETILKNPTTA
TDAYSLIALGNFSLQTLHQPIRDKEKERKHQEKALSIYKQVLRNDPRNIWASNGIGAVLA
HKGCVIEARDIFAQVREATADFSDVWLNIAHIYVEQKQYISAIQMYENCMKKFYKHHNVE
VMQYLARAYLRAGKLKEAKTVLLKARRVAPQDTVLLFNIAVVLQRLAMAILKDEKSTLDV
VLQAVHELELAQRYFQYLSICGDKTRFNVDIAGMEANQCQDLLSQAQYHVSRARRIDEEE
KALRRKQEEERLAFKTKQEEERKRREEEQKTSREQMLVKRQEYVEKTKGILIISENPQSK
ERKKGGRPRKDGYVSDSGSDVGEIDGAERSKRKPKERKKGVGRKRKSAADKYDSDSDGEI
QQKGKKQKKRKGKESKEEKLSAKQRLKIVSKATISTSESDSDAGARKRKLSGTGDSDSDG
SVASKRARRISSRSASEQRSRSGSRSRSRSRSRSRSGSRSRSPSKDRSRSPSKNRSRSGS
RASRRSRSKSSSRSKSHSRSRSVSRSRSPSSSPSPSKAKSSKRSPSHSPSGSESE
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccaatagaaattccattgcgggataccgacgaggttattgaggtgcatccg
gatcagttgccagaatgccaagaagtactagcgattttacgccaagaaagatcccagttg
agcacctgggtcaacgtcgccttggcatactacaaagaaaggagaacggctgacttcatc
agactattggaaactgcgagggcggagggcaatactgactatcgtgacatggagaaagat
cagatgcgcgcttacgatatgttggctgcacattatgtacaggaagcaaaccgggagaaa
tcaaaagagaaaaagcgagagttatttatgaaagccacaaacttatacactactgcagac
aagattataatgtacgatcaaaatcatttattgggcagagcatatttttgcttattggaa
ggcgataaaatggagcaggccgacgctcagtttaatttcgtccttaatcagtcaccagcg
aatattccttcgcttttaggaaaggcatgtatcgcattcaataaaaaggattatcgaggc
gctttagctttttacaaaaaggccttacgtacaaatcctaactgcccagcaaacgtacgt
atgggcatgggacattgcttcctcaaaatgaataaccaagaaaaagcaaagcaagcattt
gaaagagcactagaactcgataacaattgcgttggtgcacttattgggttagcaattttg
aaattgaatttacacgaacccgactcaaacaaattgggcgttcaaatgctgtcgcgagcc
tacactattgattctacaagcccaatggttcttaatcacctggcaaaccatttcttcttc
aagaaagattaccaaaaagtacaacatttagccttgcatgctttccataacactgaaaac
gaagccatgagggcagagagctgctatcagctggcgcgcagctttcatgctcaatgtgat
tacgaccaagcatttcaatactattatcaatcgacgcaaattgcaccagcaaattttgta
ctgccacattacggtcttggtcaaatgtacatatataggggtgacacagaaaatgctgct
caatgttttgaaaaggttttaaaaatacagccaggaaattatgaaacaatgaaaatcttg
ggatcgctctatgctaattctaattcacaagcgaagcgtgatatggcaaagtcacattta
aaaaaggttactgaacaatttccggacgacgtagaagcatggattgaattagctcaaata
ctggaacaaaatgatttgcaagcctcactaaacgcctacgctacggcatctaatatttta
cttgagaaagttaaagtagaaataccggcagaaattttaaataatgttgccgctttgcat
tatcgagttgggaatctaactttagctaagcaaaagttgaacgaagccatacaacgcgct
aaaattgaagcacaaaattcgaatgctgataagcaatattatgattccatatcggttaca
atgacctataatttagcgcgtcttaatgaagcaatgtgcagcttcgacgtggccgacaaa
ctatttaaagatatattaaaggagcaccctaactatattgactgctacttacgtttaggg
tgcatggcacgtgacaagggtctcatctttgtggcatctgacttcttcaaggacgcatta
aatatcaataatgacaatccagacgctagatctttattaggaaatttacatttggcaaaa
atgcagttcgctttgggtcagaaaaattttgaaactattttaaaaaacccgacgactgcc
acagatgcatattcgttaattgcgcttggaaatttctcattacaaaccctacatcagccc
attagggataaggaaaaggaacggaagcatcaagagaaggcattatcgatatataagcag
gtattgcgcaatgatcctcgaaatatttgggcttcgaatggaatcggtgcagtactggca
cataaaggatgtgttattgaagcacgcgacatatttgcacaagtccgagaagcaacggca
gatttttccgatgtctggttaaacattgctcatatatatgtggagcaaaaacaatacatc
agtgcaatacaaatgtacgagaattgcatgaaaaaattttataagcaccataatgtcgaa
gtgatgcagtatttggcgcgtgcatacctgcgtgctggtaaactcaaagaagcaaaaacg
gttttgttgaaagccagaagggtcgcgccacaggatacggtattacttttcaatattgcg
gtggtactgcaacggttagctatggcgatccttaaagatgagaagtcaacacttgatgta
gtactgcaagccgtacatgaattggagttagcgcaaagatactttcagtatctctctatt
tgtggcgataagactcgctttaacgtagacatagctggtatggaggctaatcaatgccaa
gatcttctctcacaagcccagtatcatgtttcacgtgctcgtcgtatagatgaagaagaa
aaggcattgcgccgtaaacaggaagaagaacgcttggctttcaagacgaaacaagaggaa
gaacgtaaacgtcgcgaggaggaacaaaagacgtctcgtgaacagatgcttgtgaagcgt
caagaatatgtggagaaaaccaagggcatattgattatttcagaaaatcctcagtccaaa
gagcgtaagaaaggaggtcgcccacgtaaagatggatatgtttctgattccggtagcgat
gttggtgaaatagatggtgctgaacgatctaaaaggaaaccgaaggaacgtaagaagggt
gttggaagaaaacgaaaatccgcagcagacaaatatgatagtgacagtgatggtgagatt
cagcagaaaggaaagaaacagaaaaaacgaaagggcaaggaatcaaaagaagagaaatta
tcagccaagcagcgtcttaaaatcgtttccaaagctacaatatcaacaagtgaatcagat
agtgatgctggtgcacgaaagcgaaaacttagtggcacgggtgatagtgacagcgatggt
agtgtggcatcaaagcgagcacgtcgtatatcatcaaggtcggcatctgagcaacgttca
cgtagtggaagtcgttcacgttcacgttcacgttctcgatctagatccggatccagatct
cgttcaccatcgaaagatagatcacgttcaccatcgaaaaatagatcgcgttcgggtagt
cgggcatcaaggcgatcacgttcaaaatcaagttcaagatctaaatcacattcgcgttcg
agatctgtttcacgttctcgttcaccatcttcttcaccgtcaccttcaaaagccaagtct
tcaaagagatctccctcacacagtccttcaggttcggaatcagaataa
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