Rhagoletis zephyria (snowberry fruit fly): 108360333
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Entry
108360333 CDS
T08513
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108360333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rze04121
]
108360333
Enzymes [BR:
rze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108360333
Ubiquitin system [BR:
rze04121
]
Ubiquitin ligases (E3)
HECT type E3
108360333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
108360333
NCBI-ProteinID:
XP_017468067
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MSIFGWGNTEHGELGLGGIEEEEILEPREIPWKPEQSVISIGCGLEHTLFLTSDGKVYSC
GCNDFGQLGHQQMTKRPQLINDLGNTVITEISGGARHSLALSEWGQLYSWGHNDYGQLAQ
QDGLDVVPSPKMIKKLATQTVIQIASGYNHSLALTNCGALYSWGSNIYGQLGVSPPSELA
HATSPRIVDSLLGIPIAFIACGGNHSFIISKSGAVFGWGRNNSGQLGLNDTTHRHFPTQL
RTIRSLRVRYIACGEQYSVFLTNDGGVFTCGKGSYGQLGHGGNMNEVLPRKVTELMGSTV
TQISCGAQHTLALVPSRGRVYGFGLGCFGQFGTRKVNSCSLPQVMVGPWVSPSGSKLLNT
ETKDNPDMGFVIRQIFCGGNHSFVTTSQFIDNILAFDCRIYEPKTQIMCITSELAKQCAM
VEKDSSIDLDLLTTVEVIFKSQACLNGSFLLGDKHFCCTSKQPGVDLVEVKQTFDYIRKV
EHESLKQIIWDKITNEIITSLMPSPADVETLRLYLILPLYHEFVNSKNYENLHTPFSNAV
LRLKEIPRKIVIMWWAQTPIEWFENLVSSYKNVVAHIISFKIAANSRGHFEKKLVTYNSN
LSAALNLLVVLHRINHKERAEKIDYDIFHWPELTDYVDIQQDYIHWLFEKNPDTFNICNY
PFLFNASAKTTLLQTDQAIQMHAAMQNAANSGILSLLTFGTPISQFIVLNVSRENLVQDT
LREIMQYSQSDLKKPLKIKFHGEEAEDAGGVRKEFFMLLLRDLLDPKYGMFKEFEDSRTL
WFADVTFETEDMYFLIGVICGLAIYNFIIINLPFPLALYKKLLDEPVDISDLRDISPALA
NSMESVLNYNQIDFEEVFNLNFEISRDIFGEAITEELKPNGSQTAVTLENKKEFVDLYVD
FIFNKAVENQFTAFRKGFMKVCWGRVLQIFKPDELMAVVVGNEEYDWQALELQCEYKNGY
NSGDQTIRWFWEVFHDLPESEKKKFLLYLTGSDRIPIQGMKAIKICIQPTNDDRFLPVAH
TCFNLLDLPRYNTKERLKYKLLQAIQQTQGFSLV
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtccatatttggctggggcaacacagaacatggcgaacttggactgggcggcattgag
gaagaagagattttggaaccccgagaaataccctggaaaccagaacaatctgtaatcagc
ataggatgcggcctcgagcatactttatttttgacttcagacggaaaagtatactcatgc
ggatgtaatgattttggtcaattgggtcaccaacagatgactaagcggccacagcttata
aatgatctcggtaatactgttatcacggaaataagtggtggcgctaggcattcattagcg
ctcagtgaatggggccagctttacagctggggccataacgactatgggcaactggcacaa
caagatggattagatgttgtgccttccccgaaaatgatcaaaaaacttgctactcaaact
gttatacaaatagcaagtggttataatcacagtcttgcattaactaattgtggcgcttta
tactcttggggttcaaacatctatggccaattaggagtatcaccgccaagtgaattggct
cacgccacttctcctcgtatagtagactcattgctgggaatacctattgcttttattgca
tgcgggggcaatcattctttcattatctcaaaatctggtgctgtatttggctggggacgc
aataatagtggacaattaggactaaacgacactacacatcgacattttccaacacaattg
agaacaattcgtagcctgcgtgtgcgctatatagcctgtggtgaacaatattctgtattt
ttaaccaacgatggtggtgttttcacatgtggcaaaggttcatacggtcagctgggtcat
ggcggcaacatgaatgaagtattgccaagaaaagtaactgagttaatgggtagtacagtt
acccaaatttcatgcggagcccaacatacgcttgctttagtgccatctcgtggtagggtg
tacggttttggattaggttgttttggacaattcggtacacgcaaagtgaatagctgttcg
ctgccacaagtcatggttggaccttgggtatctcccagcggttccaaactactgaatact
gagaccaaagataatccagacatgggttttgtaatacggcaaattttttgtgggggcaat
cattcatttgtaactacctctcaattcattgacaatatacttgccttcgattgtcgcatt
tacgagcctaaaactcaaatcatgtgtataactagtgaattagccaagcaatgtgcaatg
gttgagaaggattcatcaatcgacttggacctattaacaaccgtagaagtgatttttaaa
agtcaagcttgccttaatggatcctttttgcttggagataagcatttttgttgcacctcg
aagcaacctggggttgacttagtagaagttaaacaaacatttgactacatacgtaaagta
gaacacgaaagccttaaacaaataatttgggacaaaattacaaatgaaataattacatcc
ctcatgccatcgccggcggacgtagaaactttaagactttatttaattttgcctttatat
catgaatttgttaattctaaaaattatgaaaatcttcatacgccctttagcaatgctgta
cttcgacttaaggagatacctaggaaaatcgttattatgtggtgggcccaaacgcctatt
gaatggtttgaaaacttggtgtcgagctacaaaaatgtagttgctcacattatcagtttt
aaaatagctgcaaactccagaggtcactttgaaaagaagctcgttacttacaattccaac
ttgtcagcagctttaaatttgctggttgtgcttcatcgcattaatcataaagagcgtgct
gaaaaaatagattatgacattttccactggccagaactgaccgattatgttgacattcaa
caagattacatacattggctctttgaaaagaatcccgatactttcaatatatgtaattat
ccgtttttgttcaatgcatcagctaaaacaacgctgctgcagacagatcaagctatccag
atgcatgcggcaatgcaaaacgccgccaattcgggaatactatcgctgttaacatttgga
acgcctatttcacagttcattgttttaaatgtttctcgcgagaatttagtgcaggacact
ttgcgggaaataatgcaatatagtcaaagcgacttgaaaaagccactgaaaatcaaattt
catggagaagaggccgaagacgctggtggtgttcgaaaagagttcttcatgttgttatta
agagaccttttggatccgaaatacggcatgttcaaagaatttgaagactcacgtacactt
tggtttgctgatgttacatttgaaacagaggatatgtacttcttgattggagtgatatgt
ggcctagcgatatacaattttattataataaatttaccattcccattggcgctttataaa
aaattacttgatgaacctgttgatattagtgatttgcgcgacatttcacctgcattagcc
aattcaatggaatccgttttgaattacaatcaaattgatttcgaagaggttttcaactta
aactttgaaatatcccgtgatatctttggtgaagcgataaccgaggagctaaaacctaat
ggtagccaaacagctgttactttggagaataaaaaagagtttgtagacttatatgttgat
tttattttcaacaaggcagtggagaaccagtttaccgcgtttcgtaaaggatttatgaag
gtatgctggggacgtgtactgcaaatattcaaacccgatgaattgatggctgtggttgtt
ggcaacgaagaatatgactggcaagcgctggagctacaatgtgaatacaaaaatggttac
aattccggcgatcagacgataagatggttttgggaggtcttccatgacttaccggaaagt
gaaaagaaaaagtttcttttgtatttgacaggaagtgaccgtatacccattcagggaatg
aaggccattaaaatttgtatacaaccaacaaatgacgaccgatttctccctgtagctcat
acgtgtttcaatttattagatttgcctcgctacaatacaaaagaacgtttgaaatataag
ttacttcaggccattcaacaaactcagggttttagcttagtatga
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