Rhagoletis zephyria (snowberry fruit fly): 108360540
Help
Entry
108360540 CDS
T08513
Symbol
LOC108360540
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03030
DNA replication
rze03410
Base excision repair
rze03420
Nucleotide excision repair
rze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108360540 (LOC108360540)
03410 Base excision repair
108360540 (LOC108360540)
03420 Nucleotide excision repair
108360540 (LOC108360540)
03430 Mismatch repair
108360540 (LOC108360540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rze03032
]
108360540 (LOC108360540)
03036 Chromosome and associated proteins [BR:
rze03036
]
108360540 (LOC108360540)
03400 DNA repair and recombination proteins [BR:
rze03400
]
108360540 (LOC108360540)
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108360540 (LOC108360540)
DNA Replication Termination Factors
ELG1-RFC complex
108360540 (LOC108360540)
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108360540 (LOC108360540)
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108360540 (LOC108360540)
Check point factors
HRAD17(Rad24)-RFC complex
108360540 (LOC108360540)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
AAA_lid_RFC1
DNA_pol3_delta2
AAA_16
AAA_22
AAA_assoc_2
Mg_chelatase
AAA_11
Rad17
DUF815
AAA_24
AAA_30
Gp44_lid
RuvB_N
AAA_14
AAA_19
SLFN-g3_helicase
AAA_5
DNAX_ATPase_lid
bpMoxR
ResIII
AAA_7
AAA_3
MCM
AAA_28
DUF1424
TPR_TTI1_2nd
Motif
Other DBs
NCBI-GeneID:
108360540
NCBI-ProteinID:
XP_017468366
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MQAFLKTGKTTTHEKSQASTSGGSSTAAAGSVERRKPPAPWVEKYRPKSVDDVVEQSEVV
AVLRKCVEGADLPNMLLYGPPGTGKTSTILAAARQIFGDIYRERILELNASDERGIAVVR
TKIKNFAQLTASNTRPDGRPCPPFKIIILDEADSMTHAAQAALRRTMEKQSRSTRFCLVC
NYVSRIIEPITSRCTKFRFKALGDEQIITRLRHICELEGVKIDENAYKSIVQISGGDMRR
AITTLQSCYRLKGASNVINTEDLLEMSGIIPDKYLEEFLEVCRSGNYTKLEDFVRQIGYE
AYSIGQMLEQFNEYVLRCPTLTNKQKSLICDKLGECSFRLQDGGSEYLQIMDLGCAIILA
LK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcttttctaaaaacaggcaaaactactacacatgaaaaatcacaggccagtaca
agtgggggttcttcaactgccgcagccggtagtgttgagcgtcgtaaaccgccagctcct
tgggttgagaagtatcgccccaagagtgtggacgatgtcgtcgaacaatcagaagttgta
gctgttttgcgcaaatgcgttgaaggcgcagatttgccaaacatgcttttgtatgggcca
cccggaactggtaaaaccagcacaatattagcagctgcacgccaaattttcggtgatatc
tatcgcgaacgtatattagagctaaatgcttcagatgaacgtggaattgcagtagtacgc
acaaaaatcaagaattttgcccaactgactgcgagtaatacacgaccagatggtcgccca
tgcccaccttttaagattatcatactcgatgaagccgactcgatgacgcatgccgcgcag
gctgccttgcgccgcactatggagaagcagagtcgtagcacacgtttctgtttggtgtgc
aattacgtatctcgtatcattgaaccgatcacatcgcgttgcaccaaattccgttttaag
gcattaggtgatgagcaaattattactcgtttgcggcacatttgcgagctggaaggtgta
aaaatcgatgaaaatgcatacaagtctatagtgcagatatcgggtggtgatatgagacga
gccataactacactacaatcatgttatcgcctaaagggggcatcgaatgttatcaatact
gaggatttactggaaatgtcgggcatcataccggataaataccttgaagaatttttagaa
gtatgtcgatctggaaattatacaaaactggaagattttgtgcggcagataggttacgaa
gcttacagcattgggcaaatgttggaacaattcaatgagtatgtgctccgatgtcccaca
ctaacaaataagcagaaatctctcatttgcgacaagcttggagaatgttcctttcgccta
caggacggtggatcggaataccttcaaattatggatttaggatgtgctatcatactcgct
ctcaaatag
DBGET
integrated database retrieval system
