Rhagoletis zephyria (snowberry fruit fly): 108360577
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Entry
108360577 CDS
T08513
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108360577
03036 Chromosome and associated proteins [BR:
rze03036
]
108360577
Transcription factors [BR:
rze03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
108360577
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
108360577
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
GRAM
Motif
Other DBs
NCBI-GeneID:
108360577
NCBI-ProteinID:
XP_017468416
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MADVLEYSDITAEVRGVLTPGRLKLTDQHIIFKNNKTGKVEQIAAEDIELINSQKFVGNW
GLRIFTKNGTLHRFCGFRDSEHEKLGKFLKKTYNQDMVEKELCVKGWNWGTARFLGSALS
FDKDSKTIFEIPLQHVSQCMTGKNEVTLEFHQSDDAPVGLLEMRFHIPAVESADEDPVES
FQNNVMSKASVISASGDAIAIFREIHCLTPRGRYDIKIFSTFFQLHGKTFDYKIPMDSVL
RLFLLPHKDNRQMFLVLSLDPPIKQGQTRYHFLVLLFGPEEETSIELPFTDEELKEKYEG
KIEKELSGPLYEVMGKVMKVLIGRKITGPGNFIGHSGTAAIGCSFKAAAGYLYPLERGFI
YIHKPPLHIRFEEVASVNFARSGGSTRSFDFEITLKNGTVNTFSSIEKEEYAKLFDYIQQ
KKLRVSNIGKDKGGSGYNDVDFGDSDNENEPDVYLARVKAEAREKESDDDEGSDEESTDE
DFKPNEAESDVAEEYDSNVQSDSDDSDASGGGGGGGGSDSGAEKKKKAKKEKKEKKERKE
RVKKTSKTKKDANKPKRATTAFMLWLNETREQIKKDNPGIKVTEIAKKAGEMWKEMKDKS
KWEELAAKDKQRYQDEMKDYKPTASEESGIKSGGATKKRKKESPTKKSPASTGGFKSKEY
ISDDESSSDNEDKKDESGAADSEPEKKKSKSADKSVKDDKKKKKKEDSDEESEASASGGS
DEEDDEEVEATDDGEGSD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtactcgaatatagcgacattaccgccgaagtgcgtggcgtgttgacaccc
ggtcgcttgaagctcactgatcagcatattattttcaaaaataacaaaactggcaaagta
gagcaaatcgcagccgaagatatagagctcataaattcgcaaaaatttgttggtaattgg
ggtttgcgtatattcacaaaaaatggcacactgcatcgcttctgtggctttcgggattcg
gagcacgagaaattgggtaaattcttgaagaaaacctacaatcaggatatggtggaaaag
gagttgtgtgtcaaaggttggaattggggtacggcacgtttccttggctcagcgctcagt
tttgacaaggatagcaagactatctttgaaataccactgcaacacgtgtctcaatgtatg
acgggtaaaaatgaagtaacattggagtttcatcagagcgatgacgcaccagtcggtttg
ttggaaatgcgtttccacataccagctgtagagtcggctgatgaagatccagtggagagt
ttccagaacaatgtaatgagcaaggcctcggttatatcggcctctggcgatgctattgct
atcttccgtgaaatacactgccttacaccgcgtggtcgctacgatatcaagattttctca
accttctttcaattgcacggtaaaacttttgattacaaaataccaatggattcggtgctg
cgcctctttttattaccacataaagataacaggcaaatgtttctcgtgctttcgttggat
ccaccaattaaacaaggtcagacgcgttatcacttcttagtgctgctatttggtccagaa
gaagagacttcaatagagttgccgttcaccgacgaagagttgaaggaaaagtatgaagga
aaaatcgaaaaagaactctctggaccgttgtatgaagttatgggtaaagttatgaaggtg
ctaattgggcgtaaaatcacaggccctggcaattttattggacattctggtactgctgct
atcggctgttcgttcaaagccgccgctggttatctctatcctcttgagcggggttttatc
tacatccataagccgcccttgcatatacgttttgaagaagtagcatcagtgaactttgcg
cgtagcggcggttccactcgcagttttgattttgaaataacattgaaaaacggcacagtg
aacacattcagctccatcgaaaaggaggagtacgccaaactttttgactacatacaacag
aagaaattgcgcgtcagcaatattggcaaggataaaggtggttctggttacaatgatgtg
gactttggtgattcggataacgagaatgaacccgacgtttatttggcacgtgtgaaagcc
gaggctcgcgaaaaggaatcggacgatgatgaaggatctgatgaagagtcaacagatgag
gacttcaagccaaatgaagcagaatcagatgtggccgaagagtacgacagcaatgtgcag
agcgatagcgatgattcggacgcgagtgggggaggcggcggtggtggtggtagtgactca
ggcgctgaaaagaagaagaaagcaaaaaaagagaagaaggaaaagaaggagcgcaaggag
cgtgtgaaaaaaacttctaaaaccaaaaaagatgccaacaaacctaaacgcgccacaaca
gcctttatgttgtggctaaatgaaactcgcgagcaaatcaaaaaagataatccaggcatc
aaggtaactgagattgcaaagaaggccggtgaaatgtggaaggagatgaaagacaaatcc
aaatgggaggaactggctgccaaggataagcagcgctatcaagacgagatgaaggattac
aagcccacagccagcgaggagagtggcatcaagtcgggtggtgcaacgaagaaacgaaaa
aaggaatcgccaacaaagaaatcaccagccagtacaggtggtttcaaaagtaaagaatac
atttccgatgatgaatcatcttctgataatgaagataagaaagatgaatcgggcgcggct
gactcagagccagagaagaaaaagagcaaatccgccgataaatcagttaaagatgataag
aaaaagaagaaaaaggaggacagcgatgaagaaagtgaggcttctgcgagtggtggtagc
gatgaagaggacgacgaagaagtagaagctacagatgatggcgaaggcagtgattaa
DBGET
integrated database retrieval system
