Rhagoletis zephyria (snowberry fruit fly): 108360599
Help
Entry
108360599 CDS
T08513
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03440
Homologous recombination
rze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108360599
03460 Fanconi anemia pathway
108360599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rze03032
]
108360599
03400 DNA repair and recombination proteins [BR:
rze03400
]
108360599
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108360599
DNA replication proteins [BR:
rze03032
]
Eukaryotic type
DNA Topoisomerases
108360599
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108360599
FA (Fanconi anemia) pathway
108360599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-GeneID:
108360599
NCBI-ProteinID:
XP_017468439
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MFKSLKYVKYAYNFKRDFRQEITFNMKYLNVAEKNDAAKTIAGLLSIGTATRREGLSVYN
KIYEFQTEINGRMSKMVMTSVSGHLLQLEFIGAYRRWNEVDPSALFSAPVQKGCNENYQP
ILRTLEKEVRSCSGLIIWTDCDREGENIGFEIIDVCRKVKPNLKVYRAVFSEITKASVHR
AVQQLTEPNKKLSDAVDVRIEIDLRTGAAITRFQTMRLQRLFPEKIADKLISYGSCQIPT
LGFVAERYKEIEAFVSESFWKLKVSHMTDDLTVDFIWARNRLFDKAACEDYLLLCLADPK
AKVEEVTVKTKHKWRPTPLDTVEMEKLGSRKLKISAKETMTIAEKLYSKGIISYPRTETN
QFSKDIDLRALVEQFNQHPDWGNFARRVGEWGPNPRNGNKSDQAHPPIHPTKLVTDLQGN
DARIYELICRHFLACVSKDAVGSETVVRINIADEKFTATGLFVYERNYLDIYVYEKWNAK
QIHKYEQGQLFDPTEISMQEGATTAPPLLTEADLIALMEKHGIGTDATHAEHINTIKERG
YIGVVDKGCLVPGIIGMGLYEGYDAMDLALAKPMLRAAFESDLKDISTGKKNPKTVLNEQ
IQKYLEAYKQITEKVTAMDNKMSLRINETPATNESQRSDGGNITRELFQCPKCSVAPLSL
RQKKNQNSYYIGCMNFPDCKNTIWLSEECLEPKVLSETCQRCGPNVKLIKLKFASMYYKT
LFKTPSGWYKTCFRCDQQFQDNFNINLDQVKRTGGIVGTATQDSNTITAGVALSAAFRNS
ETIRGSECPRNINENRNMSKSKSNTETKQLPLKKKTKSTTQSVRTYFTVASEQTLIDQSS
VPMDIESSVVPDLTLDNFFNDGFDEVMCAVDIQTETATNTTNIPARNAINERASVGSDSF
RSINKCTSGSVKSTNSNFDECFPDLNDFIWGTSGHKIRSLNGNEYKSSQNLQSKNQDVRT
RLSKTDQYNWDNKTQHNVAPTTNIQCCGCHQKAKQCS
NT seq
2992 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaatctttgaaatatgttaagtacgcatataactttaagcgtgacttccgtcag
gaaatcactttcaatatgaagtacctaaatgttgcggaaaagaacgatgctgcgaaaaca
atcgcgggccttttatcaataggaacagcaacaaggcgagaagggttatctgtttataac
aagatttacgaattccaaacagagataaatggacgaatgagtaaaatggttatgacatca
gtatccggtcatttgctccaactggagtttattggagcctatcgacgatggaatgaagtt
gatccttcggcgttgtttagtgcgcctgtacaaaaagggtgtaatgaaaattatcagcca
attttgcgaacattagagaaggaagtgcgtagttgtagtgggctaataatatggacggat
tgtgatagagaaggagaaaacattggcttcgaaataattgatgtttgtcgtaaagttaag
ccgaaccttaaagtttaccgcgcggttttttctgaaataaccaaggcatcggttcatcga
gcggttcaacaattaactgaacctaacaagaaattaagtgatgctgtggatgtacgtata
gagattgaccttcgaacaggtgcggcaattacacggtttcagactatgagactacaacgt
ttatttcctgaaaaaattgccgataagctgatttcatacggtagttgccaaataccaact
ttggggtttgtcgctgaacgatacaaagaaattgaggcatttgtatctgaatcattttgg
aagttaaaagtttcacacatgactgatgatctaaccgtcgatttcatttgggctcggaac
cgattatttgataaagcggcttgtgaagattacctattgctgtgtttggccgatccaaaa
gcaaaagtcgaagaagttacagttaaaacaaaacataagtggcgaccaactccattggac
actgtagagatggaaaagttaggatcgcgtaagcttaaaatttcggcgaaagaaacaatg
actattgcagaaaagctttattccaaaggtataatcagttatccacgcacagaaacaaat
caattctctaaggatatagatttgagagccttagtcgagcagttcaatcaacatccggat
tggggcaatttcgcgcgtcgggtaggcgaatggggtcctaatcctcggaatggcaacaaa
agtgatcaggcacatccgcctattcatcccacaaaactagtaacagatctacaagggaac
gatgcacggatatacgagttaatatgccgccactttctagcctgtgtgagcaaagacgca
gttggatctgaaactgtagtacgcataaatattgccgatgaaaagtttacagcaaccggt
ctattcgtttatgaacgaaactatctcgatatttatgtatatgaaaaatggaatgcgaaa
caaatacataaatatgagcaagggcagttatttgatcctacagaaatatcaatgcaagaa
ggtgccactactgcgccaccacttttgacagaggctgatttgatagctttgatggaaaaa
catggcattggaactgatgcaactcatgctgaacatataaacacaattaaagaaagagga
tacatcggagtggttgacaaaggttgtctcgtaccgggtattataggaatgggtctatat
gagggctatgatgcaatggatctggctttagccaaacccatgttgagggcagcatttgag
tcggatttaaaagatattagcactggaaaaaaaaatcctaagacggtactgaatgaacaa
attcaaaagtatttggaagcgtacaagcaaattacagaaaaggtcaccgccatggataat
aaaatgtctttacgaataaatgaaactcctgcgacaaacgaaagccagaggagcgatggg
ggtaatataacaagagaactatttcaatgtccaaaatgttcagtagctccgttatcgttg
cggcagaaaaaaaaccaaaacagctattatataggctgcatgaattttcctgattgtaag
aacaccatttggctatcagaagagtgcttagagccaaaagttttatcggaaacttgccag
cgttgtggaccgaatgtaaaattaattaaattaaaattcgcgtctatgtactacaaaacc
ttgtttaaaacaccttctggctggtacaaaacatgcttccgctgtgaccaacagtttcaa
gataatttcaatattaatcttgatcaagtaaagcgaactggtggaattgttggaactgcc
acccaagattcaaatactattacggctggtgttgctttatccgccgcttttagaaatagt
gaaaccattagagggtcagaatgtccgagaaatataaacgaaaatcgaaatatgagcaaa
tcaaaatcaaatactgaaaccaaacagctgccacttaagaagaaaactaaaagcacaacc
caaagcgttcgaacgtacttcacagtcgcaagtgaacaaacattaattgatcagtcttca
gttcctatggatattgaaagttcggtagttcccgacttgacattggataattttttcaat
gacggtttcgatgaagttatgtgtgcagttgatatacaaaccgaaaccgccacaaataca
accaatattcctgcacgaaatgcaatcaacgagagagcttctgtcggttctgattcattt
agatctataaataagtgtacctctggatctgtaaaaagtacgaattctaatttcgatgag
tgctttccggacttaaacgattttatctggggtacttctggacacaaaatacgatctctt
aacggcaatgaatataaaagtagccagaatttgcaaagtaaaaatcaagacgtcaggacg
cgattatcaaaaactgaccaatataactgggataataaaacacaacataatgttgcacca
accacgaatattcaatgctgtgggtgtcatcagaaggctaaacaatgtagct
DBGET
integrated database retrieval system
