Rhagoletis zephyria (snowberry fruit fly): 108360647
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Entry
108360647 CDS
T08513
Name
(RefSeq) protein slit isoform X1
KO
K06839
slit 2
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rze00536
]
108360647
Glycosaminoglycan binding proteins [BR:
rze00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108360647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Laminin_G_1
LRRNT
EGF
Laminin_G_2
LRR_1
LRRCT
hEGF
LRR_9
LRR_14
EGF_TEN
LRR_LRWD1
EGF_2
EGF_3
LRR_12
Motif
Other DBs
NCBI-GeneID:
108360647
NCBI-ProteinID:
XP_017468503
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MTHLQPQRRFYSPMRRFKGGGGGDGAGSLSAASVSRYAQADARNSNSNSKNNNNSSNSNN
SESAIAIDAAFASASIGGGGGDCGVETVFNTNACTAAVALDCCSSNGGDGVVSAAHCHTP
SSSRTASHPTAMYTRAAASILHPNSHSVLHHLPPIILRRERRLCWLFCVNSHFLLLILLL
LLAACGDFLQVAAEPYGGSSVGIHIPGGSLGVISESRCPRVCSCNGLTVDCSHRGLTQVP
RKISADVERLDLQGNNITVIFEADFQRLTKLRILQLTDNQIHTIEKGAFQDLVSLERLRL
NNNLLKAIPENLVSSSASLLRLDISHNIITTVGRRVFKGAQSLRSLQLDNNQITCMDEHA
FKGLIDLEILTLNNNNLTSLPHNAFSGLNRLRALRLSDNPFSCDCHLSWLSRFLRSAPRL
APYTRCQSPSQLKGQNVADLHDQEFKCSGLTENAPMECGMENSCPHPCRCADGIVDCREK
SLTSVPVSLPDDTTELRLEQNFITELPPKAFANFRRLRRIDLSNNNISRIAHDALAGLKA
LTTLVLYGNKIKDLPSGVFKGLTSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQ
SLANGTFDAMKSIQTLHLAKNPFICDCNLRWLADYLHKNPIETSGARCEAPKRMHRRRIE
SLREEKFKCSWDDMRIKLSSECRADVDCPAMCQCDGTSIDCSGRGLKEIPRDIPLHTTEL
LLSDNELGRIKSDGLFGRLPHLVKLDLRRNHITGIEPNAFEGANRIQELVMAENKIREIS
NKMFLGLHQLKTLNLYNNQISCVMPGSFEFLSSLTSLNLAANPFNCNCHLAWFSEWLRKK
GLIGGAARCAAPSKVRDMQIKDLPHNEFKCTSDNNEGCLGDGYCPPACTCTGTVVRCSRN
QLKEIPRGIPAETSELYLESNEITMIHLDRIRHLKSLTRLDLSNNQITFLSNYTFANLTN
LSTLIISYNNLQCLQRYALAGLQNLRVLSLHGNRISMLPEGSFEDMKSLTHIALGSNPLY
CDCSLKWFSDWIKLDYVEPGIARCAEPDYMKDKLILSTPSHNFMCKGKVSNEIMAKCDAC
YTHPCENKAQCIPLPQRDYQCLCQPGYHGKHCEFMIDACYGNPCRNNATCTVLEEGRFSC
QCAPGYTGARCETNIDDCLGETKCQNNATCVDGVESYTCECQPGFTGQYCDTKINFCSDE
FNPCANGAKCHDHFTHYTCECMAGFHGINCTQNIDDCQNHICQNGGTCIDGINDYVCKCP
DDFTGKYCEGHNMVSMMYPQTSPCQNHECKHGVCFQPNPSGSDYLCKCHPGYTGKWCEYL
TSISFVHNNSFVEMEPLRTKPDANVTIVFSSSEQNGILMYDGQDAHIAVELFNGRIRVSY
DVGNYPVSTMYSFEMVADGKYHCVELLAIKKNFTLRVDRGLARSIINEGSNDFLKLTTPM
FLGGLPPEPGQQAYKNWQIRNLTSFKGCMKEVWINRKLVDFENAARQQKITPGCALLEGE
AAEDDEQDFMDETPHIKEVDPCENHKCRRGSRCVPNSTYRDGYQCKCKQGQKGRYCEQGE
GTTEPASITVTSTCRKEQVREYYTENDCRSRQPLKYAKCVGGCGNQCCAAKIVRRRKVRM
VCSNNRKYIKNLDIVRKCGCTKKCY
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacctgcaaccccaacgtcgcttctactccccaatgcggcgatttaaaggaggc
ggtggtggtgatggtgctggcagcttaagcgcagcaagtgtcagtagatatgcacaagca
gatgctcgcaacagcaatagcaatagcaaaaacaacaacaactccagcaacagcaataac
agcgaaagtgcaattgccattgacgccgcctttgcttctgcctctatcggcggtggtggt
ggtgattgtggtgtagaaacagtgtttaacactaacgcttgcacggcagctgttgcgctc
gattgttgcagcagtaatggtggtgatggtgttgtaagtgcggcacattgccacactcca
tcgtcctcccgcacagcaagccacccgacagcaatgtacacacgcgccgccgccagtatt
cttcaccccaacagccacagcgttctccaccaccttccaccaatcattcttcgtcgtgaa
cgtcgcctttgttggctcttttgtgtaaattctcactttctcctcctcatcctcctactg
ttgcttgctgcctgcggtgatttccttcaggttgccgccgaaccatatggcggctcttcg
gtgggcatacatatacccggcggcagtttgggcgtgatcagtgaatcacgttgtccgcgt
gtgtgttcgtgtaatggcctgacggtagactgttcgcatcgtggtttaacacaagtgccg
aggaagatatcagcggatgtggagagactcgatttgcaaggcaataacataactgtcatt
tttgaagctgactttcaacgcttaacgaaactacgaatactccaactaacggataatcaa
atacacacaattgaaaagggcgcattccaggatctggtgtcactggagcgattgcgcctt
aacaacaatctgctaaaggcgatacctgaaaatctagtgtcaagttcagcgagtcttttg
cgattggatatctcgcacaatatcattacaacagtgggacgacgtgtcttcaagggcgcg
caatctttgcgctctctacagttggacaacaatcagatcacctgtatggatgagcatgcg
tttaagggtcttattgacttggaaattctcactctcaacaacaacaacttaacttcgctg
ccgcataacgcttttagtggtctgaatcgcttacgtgctctacgtctgtctgataatccc
ttttcttgtgactgtcatttgtcgtggctttcgcgtttcttgcgtagcgctcccagactt
gcgccatatacgcgctgtcagtcgccttctcagctaaagggtcaaaatgtggcggatctg
catgatcaggaattcaagtgttcaggtctcaccgaaaatgcgccaatggaatgtggcatg
gagaatagctgtccacatccgtgtcgttgtgctgatggcatcgttgattgtcgcgagaag
agtctcacaagtgtacctgtgtcactgccagatgatacaaccgagctccgcttggaacag
aatttcattactgaattgccaccaaaagcatttgcgaatttccgtcgcctacgtcgcatt
gacctatcgaacaataacatttcgcgtattgcccacgacgctttggctggcctaaaagcg
ctcaccacactcgtactctatggcaataaaataaaggatttgccctcaggcgtatttaaa
ggacttacatcgctgcaactactcctgttgaatgccaatgaaatctcttgcatacgcaag
gacgcttttcgcgatttgcacagtctcagcctgctttcgctctacgataacaacattcaa
tcgctggctaatggcaccttcgatgcaatgaagagcatacaaacactgcatctggcaaag
aatcccttcatttgtgactgcaatcttcgctggttggctgattacttgcacaaaaacccc
atcgagacaagtggcgcacgctgcgaagccccaaagcgaatgcatcgacggcgcattgag
tcgttgcgtgaggagaaattcaaatgctcatgggacgatatgcgtattaaattgtcgagc
gaatgtcgcgcagatgtcgattgcccggcaatgtgtcagtgcgatggtacttcaattgat
tgctcaggtcgtggccttaaagaaattccacgcgatataccgctacataccactgaacta
ctcttaagcgacaatgagctggggcgcatcaaatccgatggtctctttggtcgtctgcca
catctggttaaactcgatttgcgacgcaatcatataaccggcattgaaccgaatgccttt
gagggtgcaaatcgtatacaagaattggttatggctgaaaataaaattcgagagatttcg
aataaaatgtttttgggtttacatcaactgaaaacactgaatctttataacaatcaaatt
tcttgtgtgatgcctggttcatttgaattcctgtcatcgctcacctcgctaaacttggct
gccaatccattcaattgcaactgtcatttggcctggttttccgagtggctacgaaagaag
ggtctgatcggcggtgcggcacgttgtgctgccccctcaaaagtacgtgatatgcaaatt
aaggatctgccacataacgagttcaaatgcacatccgacaacaatgaaggctgtttgggc
gatggctattgtccgcccgcctgcacttgcaccggcaccgtagtacgttgttcgcgcaat
caattaaaagagataccacgtggcataccggcggaaacatccgagttatatctggaatcg
aatgaaataacaatgatacatttagatcggatacgacatttgaaatccttgacgagatta
gatttgagcaacaatcaaatcacgttcctctctaattacaccttcgccaacctgacgaat
ctgtcgacgctcatcatttcgtataacaacttgcaatgtctgcaacgctacgccttagcc
ggtctgcaaaatttgcgtgtactctcgttgcatggtaatcgtatatcaatgctgccggaa
ggttcattcgaagacatgaaatcgctaacacacattgcgcttggcagcaatccactctac
tgcgattgctcgctcaaatggttctcagactggatcaaattggactatgtggagccgggt
atagcacgttgcgccgaacccgattacatgaaggacaaactgatactctcgacgccctca
cacaattttatgtgcaaaggcaaagttagcaatgagataatggccaaatgtgacgcctgc
tatacgcatccatgcgagaacaaggcacaatgcataccactgccacagcgcgactaccaa
tgcctctgccagccgggctatcacggtaaacattgtgaattcatgatcgacgcctgctat
ggcaatccatgccgcaacaatgccacctgcactgtgctggaagagggacgtttcagctgt
caatgtgcgcctggctatactggtgcgcgttgtgaaacgaacattgacgattgcctgggt
gagaccaagtgtcagaataatgcaacctgtgtggatggtgtggaatcgtatacgtgtgaa
tgtcaaccgggttttactggccaatactgcgacacaaagatcaatttttgcagtgacgaa
ttcaatccatgcgcgaatggcgccaagtgtcacgaccactttacgcactacacctgcgag
tgcatggccggtttccatggcatcaattgcacacaaaacatcgacgattgccagaatcat
atttgccaaaatggcggcacctgcatagatggcatcaacgattatgtgtgcaagtgtccg
gatgatttcacgggcaaatactgtgagggtcacaatatggtctcgatgatgtatccgcag
acatcaccttgccagaatcacgaatgcaaacatggcgtttgcttccagccgaacccctcg
ggctccgattacttgtgcaaatgtcatcctggttacaccggcaagtggtgcgaatacttg
acgagcattagctttgtgcataacaattcctttgtggaaatggagcctttgcgcaccaag
ccagatgcgaatgtaacgatcgtctttagcagttcagagcaaaatggcatactgatgtat
gatggacaggatgcgcacatagctgttgaattgttcaatggacgcatacgcgtaagctat
gatgtgggcaattatccagtctccacaatgtatagcttcgaaatggtggccgatggtaaa
tatcattgcgtggagttgttggctattaagaaaaatttcacattgcgcgtcgatcgcgga
ctggcaagatcgattataaatgaaggctccaatgattttctcaaattgactacaccaatg
tttttgggcggcttgccaccagaaccgggacagcaggcgtataagaattggcaaattcga
aatttgaccagctttaagggctgcatgaaggaggtgtggataaatcgcaagctggttgac
tttgaaaatgcagcaaggcagcaaaagattacacccggctgtgcattgcttgaaggtgaa
gcggcggaggatgacgaacaggactttatggacgaaacaccgcacatcaaagaggtggat
ccttgcgaaaatcacaagtgtcgccgcggcagccgctgtgtgcctaattccacataccgc
gacggctatcaatgcaagtgcaagcagggtcagaagggccgctactgcgaacaaggtgag
ggcacaactgagcccgcatcaataactgtaacctccacttgtcgaaaggaacaggtacgc
gaatattataccgaaaacgattgtcgatcgcgtcagccactcaaatatgcgaaatgtgtg
ggcggttgcggaaatcagtgctgtgccgcgaaaattgtacggagacgaaaggttcgcatg
gtgtgcagcaataatcgcaaatatatcaaaaatttagatatcgtgcgtaaatgtggatgt
acaaagaaatgctactga
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