Rhagoletis zephyria (snowberry fruit fly): 108360684
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Entry
108360684 CDS
T08513
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108360684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108360684
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108360684
mRNA degradation factors
5'-3' decay
Lsm complex
108360684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
108360684
NCBI-ProteinID:
XP_017468565
LinkDB
All DBs
Position
Unknown
AA seq
137 aa
AA seq
DB search
MDDLNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYG
DIPRGVFIIRGENVVLLGEIDREKESNLPLKEISVDEILDAQRREQEQRQEKHRLISKAL
KERGLAVNTDIINEDFC
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctaaatccacttgccggtacggcacatcttttggaagaagtggataagaag
ttaatggtgctattgcgcgatggacgaacgctaattggttacctgcgctcagtagatcaa
tttgccaatttggtgctgcaccgaaccatcgaacgaatacatgtgggcaatgagtacggt
gatatacctcgtggagtgttcattatacgtggggagaatgtcgtgttgctgggagaaatt
gatcgggaaaaagagtccaatttaccactgaaagagatttctgttgatgaaatactagat
gcacaacgtagggaacaagaacagcggcaggagaaacatcgactaatatcgaaagcacta
aaggagcggggtttagctgtaaacacagatataattaatgaagacttttgttaa
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