Rhagoletis zephyria (snowberry fruit fly): 108360707
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Entry
108360707 CDS
T08513
Name
(RefSeq) intron-binding protein aquarius
KO
K12874
intron-binding protein aquarius
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108360707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108360707
Spliceosome [BR:
rze03041
]
Complex B
Other components
Prp19-related factors
108360707
Complex C
108360707
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
AAA_16
SLFN-g3_helicase
Tfb5
AAA_22
nSTAND3
DnaB_C
UvrD_C_2
AAA
PhoH
RecA_N
ATPase
nSTAND_NTPase5
AAA_5
Motif
Other DBs
NCBI-GeneID:
108360707
NCBI-ProteinID:
XP_017468597
LinkDB
All DBs
Position
Unknown
AA seq
1567 aa
AA seq
DB search
MKQKRKHPSTEDGGSKQNPHTVTVSQISADIIWQLASQYWSPETPVDELLPYNGNIIEDI
YCREILDHRSSTRRIMMLEFSQYLEKYLWPNYKRETATHAHLMSIVAMVNEKFRERVEVW
PIFESKPEEYPAFFRHVLETCLPAETSKGRHATMREKTALIVFLNHCFNSMEIELCREQA
KRLVSLSMWSCLQPKRLEQELREVPEWRKFWRRLQKKEKGVQMPEVAWERHFLQNLIIQF
LNILEAIPLETDLAPSVVTYCERFLEFVVDLEALLPTRRFFNTVLDDTHLLVRAQICNLV
QREEGKLFGQLLDMLKFYTRFEISDVTGDSLTDHQMTQLHYKKITSLQRAAFAKFPDLRL
FALSNVANVDTREALHRHFGALDAKALKEIASFLNLVPDTLEPPFQWHRLDDEFLKELLI
TRHERRCSQLEALNEMPLYPTEDIIWDENVVPSEYFSGDGCLALPKLNLQFLTLHDYLLR
NFNLFRLESTYEIRQDIEDAVSRMLPWQSEDGDVIFGGWARMALPIASFAVVEVTKPHIG
ERKPSRVRADVSVTLSVRKEIKEEWENLRKHDVCFLITVQPTKPYGTKYNPREPFIPQVG
LVYVRGCEVEGMLDANGRVIEDGPEPRPQLPGEQRTYRVWLDSNQYRLDMDSLQDGSDDV
YESFNIIMRRKPKENNFKAVLETIRHLMNTECVVPPWLHDLLLGYGDPGAAHYSQMPNQE
RSLDFNDTFLNFDHLKSSFPGYEIKCDAPMAQRIPPFRLIFEDVPEQRDDEPEDEEEDAK
MKNALEKAIVVQPYVFESRGPYVANKPKQNSVRFTPTQLEAIRAGMQPGLTLVVGPPGTG
KTDVAVQIISNLYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEALET
EKDFSRYGRVNYVLTQRLQLLKKVQKLQESLNVLGDNAYTCETAGYFYLYNVVARWEKFL
TQATAVADATEPATWRAVFEKEFPFTRFFADASQPLFKAKTYDEYMEIAKSCFRYITHIF
TELEEFRAFELLRTGLDRSKYLLVKEAKIIAMTCTHAALKRKELVNLGFRYDNILMEESA
QILEIETFIPLLLQNPLDGYNRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRLVR
LGVPTVDLDGQGRARSSICSLYKWRYKKLDDLTHILERNEYRQTNAGFVHDYQLINVEDF
NGVGETEPNPFFYQNLAEAEYVVAVYMYMRLLGYPAEKISILTTYNGQKHLIRDVINVRC
GNNPLIGWPYKVTTVDKYQGQQNDYILISLVRTKAVGHLRDVRRLVVAMSRARLGLYIFG
RVSLFKNCFELQQTFKLLTQRPQRLQLLPDETYPTERLTNEEVDRQRIYEVNNMTQMAEH
VYEVYMKRMEELKDKLPAEGDLQMYANLPQESAEEVEDTQTIEEVTNETPESDEPPKKRA
AKETSKATKAAAAAFKPTPIVNEIGEDEPEGQDDAEAESHAAQKGAASIAVQMEVESNIA
QTEVESNVAQTEVESNAGQMEAESNAGQTEPESNTGQAEAESNAGQMEAESNAAKTENSA
IEAPTAD
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaaacgtaaacaccccagcaccgaagatggaggtagcaaacagaatccccac
acagtgactgtttcacaaattagtgcagatatcatttggcagctcgcctcgcaatattgg
tcaccagaaacaccagtcgatgagctcctgccctacaatggcaatattatagaagacatt
tactgtcgtgagattttagatcacaggtcgtcaacccgtcgcatcatgatgttggaattc
agtcaatatttggaaaagtatttgtggcctaattataaacgtgaaacggctacgcatgct
catcttatgtcaattgtagctatggtcaatgagaaattccgtgaacgtgttgaagtttgg
cccatatttgaatcgaagccggaggaatatccggcattctttagacacgtattggaaacc
tgcctaccagcggagactagtaaaggcaggcacgcaacaatgcgtgaaaaaactgcgcta
atagtgtttctcaatcactgtttcaatagcatggaaattgagttgtgtcgcgagcaggcg
aaacgattagtctcactgtccatgtggagctgtctacagccaaaacgcttggagcaagag
ctgcgggaagtgcctgagtggcgcaaattctggcgtcgtttacagaagaaagaaaagggt
gttcaaatgccggaggtagcatgggagcggcattttttgcagaatttaattattcagttt
ctgaatatattagaagccatacctcttgaaaccgatttggcacctagtgtggtaacatat
tgtgaacgttttttggaatttgttgtcgatttggaagcattgctccctacacgtcgtttc
tttaatacagttttggatgatactcatctgttggttcgtgcacaaatctgtaatttggtg
caacgtgaagaaggcaagctgttcggtcagctcctcgacatgctaaaattctacacccgc
ttcgagatcagcgatgttaccggcgattcgcttaccgatcaccagatgactcagttgcat
tacaaaaaaatcacttcactacaacgtgcggcgtttgcaaaatttcccgatttgcgcttg
ttcgctctatccaatgtcgcaaatgtagatactcgtgaagcgctacaccgtcactttggc
gcactcgatgccaaggcactcaaggaaatcgcttcctttctaaatttagtacccgatacg
ctcgaaccaccctttcaatggcatcgactcgatgacgagtttctcaaggaacttttgatt
acacgtcacgaacgtcgttgctcacagctcgaggcactcaatgaaatgccgctctatccc
acagaggatatcatttgggatgagaatgtagtgccatctgaatatttttcgggtgacggt
tgtttggcgctgccgaagttaaatttacaatttctcaccttgcacgattatctgctgcgc
aatttcaatctttttcgcttggagtcaacctatgagatacggcaagacattgaagatgct
gtaagtcgcatgctaccctggcaatcggaggatggtgatgttatctttggcggctgggcg
cgcatggcgctaccgatcgcctcattcgctgtggttgaggtgacgaagccgcacatcggt
gagcgtaaaccttcgcgtgtgcgcgccgatgtctcggtgactttgtcagtgcgtaaagag
attaaagaggaatgggaaaatttgcgtaaacatgatgtgtgcttcttaataacggtgcag
ccgacaaagccatatggtacgaaatacaatccacgcgaacccttcataccgcaggtgggc
ttggtttacgtgcgtggctgtgaggtggaaggcatgttggatgccaatggacgtgtcatt
gaagatggccctgagccacgaccgcaattgcccggcgagcaacgcacctatcgcgtttgg
ttggactcgaatcaatatcgattggatatggacagtttgcaggatggttccgacgatgta
tacgagagtttcaatattataatgcgtcgcaagccaaaggagaacaactttaaagccgta
ctggaaactatacgccatctgatgaatactgaatgtgttgtgccgccatggttacatgat
ttgttacttggctatggtgatccgggtgcagcacactattctcagatgccgaatcaggag
cgcagcttagatttcaatgacacattcctgaacttcgaccatctgaagagtagctttcct
ggttatgaaataaaatgtgatgcgccgatggcacagcgcatacctccattccgtttgata
tttgaagacgtgccagaacaacgcgacgacgagcccgaagacgaggaggaggatgcgaag
atgaagaacgcattagaaaaggcgattgtggtacaaccatatgtgttcgaaagtcgtggg
ccgtatgtggcaaataaacccaagcaaaactctgttcgcttcacacccactcaattggaa
gcgattcgcgcgggtatgcaacctggcctcacgctagtcgtaggtcctccaggtacaggc
aagacagatgtcgctgtccaaatcatatccaatctctatcacaatcatccaaatcagcgt
acactaatcgtaacacattccaatcaggcgctgaatcagctcttcgaaaaaattatggct
ctagacatagatgagcgccatttgttgcgtctcggtcatggcgaagaagccttagagacg
gagaaagacttcagtcgttatgggcgtgtcaattatgtgctcacacaacgcttacaacta
ctcaaaaaggtacaaaagctgcaggaatcgctcaatgtgctcggtgacaacgcttacacc
tgcgaaacggccggctatttctatctctacaatgtggtggcacgttgggagaagtttctc
acgcaagccactgccgttgcagatgccactgagccggcgacttggcgtgcggtattcgaa
aaagaatttccattcacacgcttctttgccgatgcatcgcaaccactttttaaggccaaa
acgtatgacgaatatatggaaatagcaaaatcttgcttccgctatataacacatatattc
acggagttggaagaattccgcgctttcgaactgctgcgcaccggtttggatcgttcaaag
tatctgcttgtaaaggaggcgaaaatcattgcaatgacttgcacgcatgcagcgttgaag
cgcaaggagttagtaaatctgggtttccgctatgacaacatactcatggaggagtcagca
cagatattggaaattgaaacattcataccgctgctattacaaaatccgctcgatggctac
aatcggttgaaacgttggattatgatcggagaccatcatcaattgccgcctgtcatcaaa
aatatggcgttccaaaagtactcgaatatggagcagagtttgtttacgcgactggtgcgt
ttgggtgtgcccaccgtcgatttggatggacagggtcgtgcgaggtcaagtatttgttcc
ttgtacaagtggcgctataagaaattagacgatcttacgcacattttggagcgcaacgag
tatcggcaaacaaatgctggatttgtgcatgactatcagctgatcaatgtggaggacttc
aatggtgtgggcgaaacagagccaaatcctttcttctatcagaatctcgctgaggctgag
tatgttgtagctgtttacatgtatatgcgtctactgggctatcccgctgaaaaaatatcc
atcttaaccacctacaatggacaaaagcatctgatacgcgatgtcatcaatgtgcgttgc
ggtaataatccacttatcggttggccatacaaagtcaccacagtggacaagtatcaaggt
caacagaacgattatatactcatatcgttggtgcgcacaaaggcggtgggtcatttgcgc
gatgtgcgtcgtttggtggtggcgatgagtcgtgcacgactgggattgtatatttttggg
cgggtgtcgctgtttaaaaactgttttgaattgcagcaaacattcaagttgttaacacaa
cgcccgcagcgtctacaattgctgccagacgaaacttatcccactgagcgtttaaccaac
gaagaagtagaccgtcaacgtatttacgaagtgaataacatgacacaaatggcggaacat
gtctatgaagtgtatatgaaacgcatggaggagctaaaagataagctaccagctgagggt
gatttgcaaatgtacgcaaacttgccacaagagagtgctgaggaagtggaagatacacaa
acgattgaggaagttacaaatgaaacgccagaaagtgatgaacctccaaaaaaacgtgct
gcaaaggaaaccagcaaggcaacaaaagctgctgccgctgcattcaaacctacgcctatt
gttaatgagatcggtgaggacgagcctgaaggccaagatgacgcagaagctgagtcgcat
gctgcgcaaaagggagctgcgtcgattgctgttcaaatggaagttgagtcgaatattgcc
caaacagaagttgagtccaatgttgcccaaacagaagttgagtcgaatgctggacaaatg
gaagctgagtcgaatgctgggcaaacagaacctgaatcgaatactgggcaagcggaagct
gagtcaaatgctgggcaaatggaagctgagtcgaatgcggcgaaaacagaaaattctgct
atcgaagcacctactgctgattaa
DBGET
integrated database retrieval system
