Rhagoletis zephyria (snowberry fruit fly): 108360879
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Entry
108360879 CDS
T08513
Name
(RefSeq) tRNA pseudouridine synthase A, mitochondrial isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rze03016
]
108360879
Enzymes [BR:
rze01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108360879
Transfer RNA biogenesis [BR:
rze03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108360879
Prokaryotic type
108360879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
108360879
NCBI-ProteinID:
XP_017468816
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MFIVRRTDNLTKLVTVAHTSLHLQKCRYLGTQIQPRGFAAAMSEALDKLEQQEAEKKVER
AAVAEQLKDTKRQKRELKRRKWVDWKTQDEQAGDTKRPAFDPADRVKRKKCAILLSYCGA
NYFGMQRNPGMQTIEEELFKAMLKHKWITEESFEAAQAACFQRAARTDKGVSAARQVCSI
KLPDTLDIKALNEDLPEQIRLFAVERVTKGFNAKDQCNARTYTYTLPSVAFADCGQKHDF
ESYRIEPAQHLKIGEVLKLYEGTKNFHNFTSRKNFLDPSVKRFIMSFSCSEPFLTPQGIE
FLTLKVKGQSFMLHQIRKMVGLAIAIARGNTTTATLDRALTEERLDLPMAPGLGLVLDTV
HYERYNDRYGGDGIHEPLTWTKQENEIKEFIERYINANIYETEYKERSMLEWLETLPLHS
YDARRDDTTNNDDSGKKQKDDDDE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgttcatagttaggagaacggacaatctcacaaagctggtaactgttgcccatacttca
ctacatctacaaaagtgccgctacttaggaacgcaaatacaacccagaggatttgctgcc
gccatgtctgaagcgcttgacaaactggagcagcaggaggcggagaagaaggttgaacgt
gcggcagtggctgaacaattgaaagacactaaacgtcaaaaacgagaactgaagcggaga
aagtgggtcgactggaagacacaagatgaacaggcgggtgatacaaagcgcccagcattt
gatccagcagatcgtgtgaagcgaaaaaaatgcgcaatattgttaagctactgtggtgcc
aattactttggcatgcagcgcaatccgggcatgcaaaccattgaggaggagttgttcaaa
gctatgttaaaacataagtggattacagaggaaagttttgaggcagcacaagcggcatgc
tttcagcgtgccgcacgaaccgataaaggggtgtctgcggcgagacaagtgtgctcgata
aaattgcccgatacgttggacatcaaagctttaaatgaagatttgccggagcaaatacgt
ttgtttgcagtagaacgcgttactaaaggcttcaatgcgaaggaccagtgcaacgcacgt
acctacacatacacactgccatccgttgcgtttgctgattgtgggcaaaaacacgatttt
gagtcataccgtattgagcctgctcagcatctaaagataggagaggtgctgaagctgtac
gaaggcaccaaaaattttcacaatttcacaagccggaaaaactttttggatccttctgtc
aaacgcttcattatgtcatttagttgctccgaaccatttctaacgccacaaggcattgaa
tttctaacgctcaaagttaagggacaaagtttcatgcttcatcaaattcggaaaatggtt
ggtttggcgatagcaattgcacgtggtaataccacgacagctacattggatcgcgcgcta
actgaagaacggttagatttgccgatggcaccaggtttgggccttgttttagacacagtg
cactacgaacgctataatgatcgttatggcggcgatggcattcatgaaccactgacttgg
actaaacaagagaatgaaattaaagaatttatagaacgttatattaacgccaatatatac
gagacagaatataaggagcggtcaatgttggaatggctagagacattaccgctgcactcg
tacgatgcgcgacgtgatgataccacaaacaacgatgatagtgggaaaaagcaaaaggac
gatgacgatgaataa
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