Rhagoletis zephyria (snowberry fruit fly): 108361045
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Entry
108361045 CDS
T08513
Name
(RefSeq) mRNA export factor
KO
K14298
mRNA export factor
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108361045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108361045
03036 Chromosome and associated proteins [BR:
rze03036
]
108361045
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108361045
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108361045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
eIF2A
Beta-prop_SPT8
DUF7165
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
108361045
NCBI-ProteinID:
XP_017469064
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MFGQPTLGGTTATPSTNRMNDFEVTMPPDDSVSALEFSPSTIPQNFLIAGSWDSSVRCWE
VEQTGKTVPKSMKTMGGPVLDVCWSDDGTKVYMASCDKQVKMWDLASDQVVQVAAHDAPV
KTCHWIKGSTYSCLMTGSWDKTLRFWDTRTPNPLMAINLPERCYCADVDYPMAVVGTANR
GLIVYSLENTPTEFKRQDSPLKYQHRTISIFKDKKKAPTGYALGSIEGRVAIQYVNPVNP
KDNFTFKCHRTTGTAGYQDIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSET
MDQSITKCAFNNNGQIFAYAVGYDWSKGHEYFNPSKKPQIFLRSCYDELKPRIA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccagccaacgctgggtggaactaccgccacaccgtctacaaaccgcatgaac
gattttgaagtaacaatgccgccggatgactctgtatccgccttagaatttagtcccagc
accataccgcagaattttcttattgccggcagctgggatagcagcgttcgttgttgggaa
gtagaacaaacgggcaaaacagtgccaaagtcgatgaaaacaatgggaggtccggtatta
gatgtgtgctggtctgatgatggcactaaagtgtatatggcatcatgtgacaagcaggta
aagatgtgggatttagcctctgatcaggtagttcaggtagcagcacacgatgcgcctgta
aaaacttgccactggataaaggggtcaacttatagctgtctgatgaccggttcgtgggat
aaaactctaaggttttgggacacgcgtacgcccaacccacttatggcaatcaacttacca
gaacgctgctattgtgctgatgttgattaccctatggctgtggtaggtacggcgaatcgt
ggcctcattgtatactcactagaaaacacgccgactgaatttaagcggcaggatagtcca
ctgaaataccaacatagaaccatatcaatatttaaggataagaaaaaagcgccaacgggt
tacgcgcttggcagcattgagggccgcgttgcgatacaatatgtaaacccagtgaatcca
aaggataactttaccttcaagtgccatcgcacaactggtacagccggctatcaagacata
tatgccgtaaacgatatagccttccacccagtacacggcactttggtgaccgtcggttca
gatggtacttttagcttctgggacaaggatgcacgcacaaaactcaaatcatcggagact
atggatcaatcgattaccaagtgcgctttcaacaacaatggacaaatattcgcttatgcg
gtgggctacgattggtcgaagggtcatgagtattttaatccgagcaaaaagccacaaatc
tttctgcgttcttgctatgatgagctaaagccacgtattgcataa
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