Rhagoletis zephyria (snowberry fruit fly): 108361367
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Entry
108361367 CDS
T08513
Name
(RefSeq) protein Smaug isoform X1
KO
K27396
protein Smaug
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rze03019
]
108361367
Messenger RNA biogenesis [BR:
rze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108361367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHAT
SAM_1
SAM_2
DUF7803
XhlA
Motif
Other DBs
NCBI-GeneID:
108361367
NCBI-ProteinID:
XP_017469462
LinkDB
All DBs
Position
Unknown
AA seq
1223 aa
AA seq
DB search
MKYTTGENSGNSHNMCGTNDQTPKTFDFARNQSPITFSEQVTTVTRFFEGWNDCERTVVI
YALLKRLRYPSLKFLQYAIDHALTQSLGSDSNLSSVIIDINANNPSYLQNLLNAYRTLHL
NDAVDALTSGSLDKESMPCYGSDFQITNCDERKLYEKKKEILCEVLNMLPLLKPGNDDAK
LAYLALVPAAVRDTMNQRVPTELVQQIFSYLLIHPAISNEDRRSLSVWLRHLEDHLHATD
KLTDPKNPNNYTINQSIAAGSDASVSSITSSSSMSNNSMSSSGSSAAGHISTSHTMPRSI
DWQTIAPPSKQHHLVQQTPLPQPKSHPDWSSFPRRDSGFSNSCLNNLSGISSSSSGSSCS
NRRNSSITDQLCDNFNGINLNELGSSQNKMGLSLGIATIGCDTNPEESSLVNGVAAAAAA
TAGTAIPGLFGNSNNTPMINIVASGANDTSLCASSSANNPNNDDHDTSFSKNGTEIVDFE
PHVTINVSEECKNGASVPAGHEQNANNQLQQKSQMEFTSMTASNYEQMDVTRWSLDGKLG
ALKTRRSNSLTTQAISTSSSSSNSSVITVNDNCSNSTENLAQFANKPRSFSLSIEHQRGV
LANSGSDTRLDDFKPGYIKFQTRNVGMSNIGLWLKSLRLHKYIDLFKNMTYEDMLCITEE
YLQGLGVTKGASHKLALCIEKLKDRSPHLSKLEQDLRNGQTKIQAAVEDLANMVLSPMKP
VEAFTSGASEDNVALGFLKVVDIVSSMIQHDTGASQDEENINVLMWVLDRSIHNEAFVNQ
STQLKELKFKLSKLKMSIGHKAHHVKNGSVGNLNKPRWGGKSRKCDVKNGSNDRINHRKN
SNDTLNFSINGVPSAQQQQHHGIHTQPADFEKVAHLNVGANNSGNNGVSQQQYKSSSYPN
FMSNQHQQGKQQHQNHHSQLSQQQQQMQPAVLSHHAHFPALPSHQQQQQPQHHRRSLNNL
IVVSGGPQQAQKMTFKPGQGIVPVVPTSTESQLRRTSLTTTITNQSSNNVNLPSAFAPSV
GNVAAGNGDTSKQKQNILQAQHQQQTKQTMTSAVMVSTDELALGGVIGPQQQPQQHSHLI
NNNSSMLNNNLLCQQQQQQLQLLAAAAAAVGNSCRNSNLLNCLCNVNANGSNNCSKTNCC
SVNNANSCSNLPTQFIEPHSGNQRSSLATPATMPLLNNINMSLKDKFPTKGSLSNSAAVN
MNDINSLDQLETLCLQMTEQAIN
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataccactggagagaatagtggcaatagccacaacatgtgtggaaccaatgac
caaactcctaaaacatttgactttgcccgaaatcagagtccaattacatttagtgaacag
gttactactgtgacgaggttttttgaaggatggaatgattgcgaacgaacagttgttata
tacgccctgctgaagcgcctgagatatcctagtttaaaattcttacaatacgctattgac
cacgccctgacgcaaagcttaggctcagattctaacctaagtagtgttatcatcgacata
aatgcgaacaatccatcgtatttgcaaaatctattaaacgcctataggacgttgcacttg
aacgacgccgtggacgctctgacatcgggctctttggacaaggaatccatgccatgctat
ggttccgattttcaaatcacaaactgcgatgagcgcaaattatacgagaaaaagaaggag
atactgtgcgaggttttgaacatgttaccgctattgaaaccgggaaacgatgacgccaag
ttagcttatttggctctcgttccagcagcagtgagagacactatgaatcagcgggtcccc
acagagttggtacaacaaatattttcgtacttactcatccaccccgctataagtaacgaa
gaccgccgctcgctcagtgtttggttgcgacatctggaagatcatttgcatgctaccgat
aagttgacggatccgaaaaaccccaacaactataccatcaaccagagcatagcagctggg
tcggatgcttcagtttcctcaataacatcgtcgtcatctatgtcgaacaattcgatgtca
tcatccggcagttcggcagcagggcacatatcgacttcgcatacaatgcctaggagcatt
gattggcaaaccattgctccgccaagcaaacagcaccacttagtgcaacaaactccgctt
ccacagccaaagtcacacccggactggtccagctttccgcggagagatagtgggttctca
aacagttgcttaaataatttgagcggtataagctcaagtagtagcggcagcagttgtagt
aatcggcgaaacagtagcattactgaccaactctgtgataatttcaatggtattaatcta
aacgaattaggatctagtcaaaacaagatgggcttgtctttggggatcgcaaccattggg
tgtgacacaaatccagaggaatcatcattggtaaatggagtggctgcagcagccgccgca
actgctggcactgcaatacctggcctttttggcaacagcaataatacgccaatgataaac
atcgtggcaagtggtgccaatgacacaagcctatgtgccagcagcagtgcaaataatccc
aacaacgacgaccatgatacatccttttccaagaatggcaccgaaatcgtcgactttgag
cctcacgtgaccatcaacgttagcgaagaatgcaaaaatggtgcttcagtgcctgcaggc
catgaacaaaatgcaaacaatcaattacagcaaaagtcccaaatggaatttacttcgatg
acggcaagtaattatgagcagatggatgtgactcgctggagcttagatggaaaactgggt
gcacttaaaactcgacgctctaatagccttactacacaagcaatatccacatcttcgtcg
tcttctaattcttcggtgattacagtcaatgacaactgttcaaattccactgaaaatttg
gcacagtttgcaaataagcctagaagtttctcgctttccatagaacaccagcgtggtgtt
ttagccaatagtggctcagatacacgcctcgatgatttcaagcccggttatataaaattt
caaacacgaaatgtcggcatgtcaaatattggcttgtggttgaagtctttgcgcttacat
aagtacattgatctcttcaagaatatgacatatgaagatatgctttgtatcactgaagag
tatttgcaaggtttaggcgtcaccaaaggcgcttcgcacaagctagcactctgcatagaa
aaactaaaggaccgctcgcctcacttaagcaaactggagcaggatttgcgaaatggtcaa
acgaaaatacaagcggctgtagaggatttagccaacatggtactctctcccatgaaacct
gtagaagcttttactagtggagcaagcgaagacaatgtagcgctcgggtttctgaaagtt
gttgatatagtgagctctatgattcaacacgacactggcgcgtcgcaggacgaggaaaac
attaacgtactgatgtgggttcttgaccgttccatacacaacgaggcttttgtgaaccaa
tccacccagcttaaggaattaaagttcaaactgtcaaagctaaaaatgtcgattgggcac
aaagcgcaccacgtcaaaaatggaagtgtaggaaatttaaataagcctaggtggggtggt
aaatcgcgcaaatgtgacgtaaaaaatggaagcaatgaccgcatcaaccatagaaaaaat
tcgaatgatacgctaaacttctcaatcaacggcgtaccttcagcgcagcagcaacagcac
catggcatccatactcaaccggctgatttcgaaaaggtcgctcacctaaacgttggtgct
aataacagcggcaataacggggtatcgcagcagcaatacaaaagttcgtcatatcccaat
ttcatgagcaaccaacatcagcagggaaagcagcaacatcaaaatcatcattcacaatta
tcccaacaacaacaacagatgcaacctgcagttctgtcacaccatgctcattttccggcg
ctaccttcacaccaacagcagcagcaaccacaacatcatcggcgatcccttaacaattta
atagtggtgtctggaggaccacagcaagcccaaaaaatgacctttaaaccaggtcaaggc
attgtacctgtagtgccaacgtccaccgaaagccaactacgccgtactagtcttacaaca
acgatcactaatcaaagcagtaataatgttaatttgccatctgcgtttgccccaagtgtt
ggaaatgtagccgccggcaatggcgacacctcaaagcaaaaacaaaatatactgcaagca
caacaccaacaacaaacaaagcagacaatgacatcagctgtaatggttagtaccgacgaa
cttgcacttggaggtgtgatcggcccacaacaacaacctcaacaacactcacatctaata
aataacaacagtagcatgctaaataataatttactttgccaacagcagcagcaacagttg
cagctattagccgctgcagccgcagctgttggcaacagctgtcgaaatagcaacttattg
aactgtctgtgcaatgttaacgctaacggtagcaacaattgtagtaaaaccaactgttgt
agtgtcaataatgccaatagttgtagcaatttaccgacccaattcatcgagccacatagc
ggcaaccaacgttcgtctctagcaacccctgcaacaatgccactgttaaataatataaat
atgtcgctgaaagataaattccctaccaaaggttccttgtccaattctgctgctgtaaat
atgaacgacattaatagtttagatcaactagaaacgctctgcttgcaaatgaccgaacag
gcaatcaactag
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