Rhagoletis zephyria (snowberry fruit fly): 108361556
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Entry
108361556 CDS
T08513
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108361556
Spliceosome [BR:
rze03041
]
Common components
Common spliceosomal components
General mRNP proteins
108361556
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
Nup35_RRM_2
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
108361556
NCBI-ProteinID:
XP_017469689
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAEDFDVEAMLEAPYMKNNASRGDYDQPANSRKSPYRDREDSSTGKGGSKSSSSTHLNGR
KHYSRSRSGSPRTTDDRKARKSKDRERHRDRDESRYSRDRDRIRDKDRVRDRERNGERER
RYGSQERDRERDRDRGIEKRRSRSKDRRRSSRSRERERERRSRERRGSKPRSERRRSRSP
TRDRRSRDRKLSPVKELRGGRPEFVSRSREKSSKRRSNSPRPFRRGRTPPNGLGDRSPRA
DLSPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFKD
PESVALALGLSGQRLLGIPISVQHTQAEKNRIANAAPVFTPKNHTGPMRLYVGSLHFNIT
EDMLRGIFEPFGKIDSIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMK
VGNVTERLDMNTSSLDTDEMDRSGIDLGATGRLQLMFKLAEGAGLAVPQAAANALLATAP
QPAPVQTQTQTPAIATQCFMLSNMFDPRTETNPAWDSEIREDVIDECSKHGGVLHIFVDK
ASPTGNVYVKCPSITTAVLAVNELHGRWFAGRVITAAYVPLLNYHSLFPDAITAVNLLAS
KRKSGE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagatttcgatgttgaagcgatgctggaggcaccatacatgaaaaataatgca
agccggggagattacgatcaacctgccaacagccgaaaatcgccctatagagatcgcgag
gacagcagtactggtaaaggtggaagcaaatcttcttcgtcaactcatttaaatggtcgc
aaacactattcaagaagtcgttctggttcaccacgtaccacagatgatcgtaaagcccgc
aaatcgaaggatcgtgaacgtcatcgcgatcgagatgaaagtcgttattcaagggataga
gatcgcattcgagataaggaccgcgttcgtgaccgggaacgtaatggcgaacgtgaaagg
cgttatggatcacaagagcgtgatcgcgagcgcgatcgtgatcgtggtattgaaaagcga
cggagccgatccaaggatagacgtcgcagcagtcgttcacgagaacgtgagcgcgagcga
cgttcaagagaaagacgtggcagtaaaccacgttcagagcgtcgtcgtagtcgatcaccc
actagagaccgtcgctcaagggacaggaagcttagccctgttaaagaattaagaggcgga
agaccagaatttgtttcaagatcaagagaaaaaagcagcaagcgccgcagtaactctccg
cgacctttccgtcggggccgaacgccaccaaatggtcttggtgatcgatcgccccgtgct
gatctcagcccagaggaacgtgatgcccgtacagttttctgcatgcaattatcccagcgc
atacgtgctcgcgatttggaggaatttttctccagcgttggaaaagtacgagatgtacgg
ttaatcacctgcaataaaaccaaacgattcaagggtattgcttatattgaattcaaagat
ccagaatcagtagcacttgcactgggtttgtcgggacaaagactattgggcattccaatt
tcggtgcaacatacacaggctgagaaaaatcgtatcgcaaatgcggcgcccgtttttacg
cccaaaaatcatacaggccctatgcggttatatgtaggttctttgcacttcaatatcact
gaagatatgcttcgaggtatattcgaaccatttggaaaaatagactccatacaacttata
atggatacagagactggtcgttcaaagggatatggatttattacgtatcacaatgcggac
gacgccaagaaagctttagagcaattaaacggatttgaattggctggccgaccaatgaag
gttggaaatgtgactgaacgtttagatatgaatacatcgtctctggatacagatgaaatg
gatcgaagtggcatagatttgggcgctactggtagactgcaactaatgtttaagctcgca
gagggtgctggtttggcagtgccgcaagctgctgcaaatgcgttattagccactgcacca
cagcccgcaccagttcagacgcaaacgcaaactccggccatagctacgcaatgctttatg
ctgtccaacatgtttgatccgcgcactgagactaatcctgcatgggatagtgaaatacgt
gaagatgtcattgatgagtgctcaaagcatggaggtgtactgcatatttttgttgacaaa
gcctctcccacgggtaacgtctatgtgaaatgtccgagcataaccacggcagtactagca
gtaaatgaactccatgggcgctggtttgctggccgcgtcattactgctgcttacgtacca
ttactgaattatcattctctatttccggatgcgataacggcggttaatttactagcatcg
aaacgaaagtctggcgaataa
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