Rhagoletis zephyria (snowberry fruit fly): 108361831
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Entry
108361831 CDS
T08513
Name
(RefSeq) uncharacterized protein LOC108361831
KO
K09175
DNA-binding protein RFX7
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rze03000
]
108361831
Transcription factors [BR:
rze03000
]
Eukaryotic type
Other basic domains
RF-X
108361831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
Pox_D5
DUF3239
Motif
Other DBs
NCBI-GeneID:
108361831
NCBI-ProteinID:
XP_017470082
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MDMTDKNVGHNGNQWSKATTSAAAAIAAQQHKQLNSSSLPGTQPMHHQQQRLYDPSALMP
AHSSIFGAGVGAALGHPAHPDGIAAYAGARFHPPPLPTQQSTLDAANLSHTIAHQHSHHQ
PHHLQHQPSPTHAPTTVLTAPAAASPIVPVQSGFVPPPLLPGAAAAVAAAATSVLTPNPF
AVTPQLEHLTSHLNLQQQIELNKIMNVMNTQVSAVGVASGGAMGTGGSNAGNLEGQALAQ
ARHIATDVPMTSAGSNSSSCGSAAVSGAINSTIAENVLNAISATPNSSVSASAPAVHGRL
TGIGVRMPNDERLRRIQEVVESGVSELAKQQIQQIVDRVATLKPVEKLLLYLRLPGEAPE
TDPLRHPQNPLGTRSEINHTINWVRSHLEHDPKVSIPKQDVYNDYIAYCDRLDIKPLSTA
DFGKVMKQVFPGIRPRRLGTRGHSRYCYAAMRKTTKLDAPQLPLLDTATVNESSLVGGVL
GSTSSFGDSTASAGDMETWQIIRNWAENVLHVKVESVQELASCIKSSTGAGELPTSNARA
TGGTVHKKYTPREPKEKRLMADMGPLKKRRKKKRKGSSSSESSCSQSQAQTQHQTSASAA
DAQLVDVKPTITTELVQIKQEILESPTMQRIQHLPATGTQLPQIAVVTESFLQQQQQQQQ
QQQMLPMNLVTEQRTVLARAPPAASAFGVVQPQTPTPQQRQPVRTALVGASSNTTAVKNL
TPKIIELGASASTAVTASASHEPATVIKEEEFLDEYNPNIFCKKVRKAQQTKGFWANSPT
PASSNVVVPTITTCAATTEVTTSATSLPAVATSVIATSGMSTSHSLRGNPDAVSTPSDLM
GPPAQISSGTSVSPSSAILGADSSGSSSQPPNAASPKVLSRNMLQMRARRQQIVAALAAE
AAANSSNNLPDADAADLPANLGLPRERVISICNMDKHELDDYFVAGEVEEEPEDQDTELL
QYFQTRDAEEKLNSLDAVKSNRHPTAPTQAATTTPQAAPNTPTTVASTVPPLVTKSLQQT
AKSFGRQQSAQAVATDGYGCATQVSNSGFTAAAGQRKQQTAIIGSPVSKPCPTMKTMAVG
SASASLTIMSQKHQQQHQQQQLHSQNSKSVMQQALTTKTHNNSNSHKRKISLSGTTLNAA
EVMASRKNCIFFPISPNSNTGSSGSNTNKSIVSSANNPKFNGSSVTLYPASTLNSSNGSG
NSGGSNACSFFVSPGQSAHRVRPKPAFALGKQHSLDNDSSDPMIGASRRRRSYANLVMSG
GNNSLMPPTSASAPPSPSVLQQQQQQQQFYGTPFCSGDMGQHSNSRSSNVQMNSNIAVNA
TDLLAAEQNSLDLDMFSAAAARAMDYGELALDELTTPLNEMQRSQSVPLSQLQRIHSPAF
SRSFQAAPYSACTSVAQTPVPHEFADSLTLFSENSCSQNSGGAGANITGKNNAQTTAVKL
LDEEAALLATDTAAMLDNLDVAEMFPADFLRMKFPSNVQGNATTTTCSSAGSSSGYSSSA
CTAFGSAALISGGGVGGTCLLSSTGNSMSRSVPSTPLPHQQQSPFASYFYGSRRRFEEEA
HLSPSLTTSGNTMGGTFTTTVFKYGNNGSGSIGGANNNYDMSRSMPTTPTATPRFRYSPT
EFTREFLSNGNTNTIDSLISGGANTGSLTDAGAPSEGLSAALTGLSGNNDALIDDSCGLS
ADAFVVNNTVTDAESMMAEANELLGNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggacatgacagacaagaatgttggtcataatggaaaccagtggtcgaaagcaacgaca
tcggcagcagctgcgattgccgcgcaacaacataaacaactcaacagcagctcattgcct
ggcacacaaccaatgcatcatcaacagcagcgtctatatgatccatcagcgttaatgcca
gcacacagcagcatttttggagcaggtgttggtgccgcacttggacatccagcacatccg
gacggtatagcagcttatgcgggtgcacgttttcacccacctccactaccaactcagcag
tctacattagatgcagcaaacttatcacatacaatagcgcaccagcattctcaccatcaa
ccgcatcacttacagcatcaaccatcgccaacgcatgctccgacaacagtgctaacagcg
ccagctgccgcttcgccaattgtacctgtacaaagtggctttgtgccaccaccattactg
ccaggtgcagccgctgcagtggcagcagccgctacgtcagttttaacgccaaatccattt
gcagtcacaccacagctggagcatcttacctcacatttaaatttgcaacagcaaatagaa
ttgaacaaaatcatgaacgtaatgaacacacaggttagcgcagttggtgtagcatcaggt
ggagctatgggaacaggaggcagcaatgcaggcaacttagaaggtcaagcgctagcgcaa
gcacgacatattgcaacggatgtgccaatgaccagtgctggcagcaacagcagcagttgc
ggtagtgctgctgtgtccggtgctataaacagcacaattgcggagaatgtattaaatgcg
ataagtgcaacgccaaatagtagtgtaagcgctagtgcgccagcagtacatgggcgcttg
acaggcattggagtaaggatgccgaatgatgaacgtttacgtcggatacaagaggtggtt
gagtcgggtgtaagtgagttagcaaagcagcaaatacaacaaatcgttgatcgtgtcgca
accctgaagcccgttgagaaattattgctttatttgcgtttacccggagaggcgcccgaa
acagatccactgcgtcatccgcaaaacccattgggaacacgttctgaaataaatcacacc
atcaactgggtccgctcacacctggaacatgatcccaaagtgtcgataccaaagcaggac
gtatataacgattatatcgcatattgcgatcgccttgacatcaaaccgctttcgacagca
gattttggtaaggtaatgaaacaagtgtttcccggtataagaccacgccgtttaggcaca
cgtgggcattcgcgttattgctacgcggctatgcgtaaaaccacgaaattggatgcgcca
caattgccacttctagacacggctacagtaaatgagtcgtctttggttggcggcgtttta
ggaagcaccagttcatttggtgactccactgcgagtgctggcgatatggaaacatggcaa
ataatacggaactgggctgaaaatgttttgcatgtaaaggttgagagtgtccaggaactt
gcttcttgcatcaaaagctccacaggtgcgggtgaattgccaacatcaaatgcgcgagct
actggtggtactgtacacaaaaaatacacaccgcgcgagccgaaagagaaacgtttaatg
gcggatatgggcccactcaagaaacgtcgcaagaaaaaacgtaaaggctcatcatcatcg
gagtcaagctgtagtcaatcgcaggcgcagacgcagcatcaaacttcggcctctgcagcg
gacgcacaattggtcgatgtaaagccgactataacaacagagctggtacagattaaacag
gaaatactagagtcgcctacaatgcagcgcatacagcatttgccagcgaccggcacgcag
ctaccccaaatagccgtagtgacggagagctttctgcagcaacaacaacaacagcagcag
cagcagcaaatgttgcctatgaatttggtgaccgagcagcgtacagtgttggcgcgtgcg
cccccagccgccagtgccttcggcgttgtccaaccgcaaactccgacgccacagcaacga
cagccagtacgtactgctttagtgggtgcgtcctctaatacaacagccgtcaagaatcta
acgccgaaaatcattgaactcggtgcatccgcatctaccgcagttacagcgagcgcatcg
catgagcccgccacagtcatcaaagaggaagagtttttagacgaatataatccgaatata
ttctgcaagaaggtgcgcaaggcgcagcaaacgaaaggattttgggccaattcaccaact
ccggcatcgagtaatgttgttgtgcccacgattacaacatgcgcagcaactacggaagtg
actacgtcggcaacgtctttgccggccgttgctacgtcagttattgcaacgtctggcatg
tcaacaagtcattcgttgagaggaaatccagacgcagtttccacacccagcgatttgatg
ggtccacctgcacaaatcagtagcggcacatcggtgagtccatcgagcgctattttagga
gcggacagcagtggcagctcatcacaaccgccgaacgctgcatcgcccaaggtcttgtca
cgcaatatgttacaaatgcgcgctaggcgccaacaaatagtcgctgctttggcagccgaa
gcggccgccaattcgagtaataatctacccgacgccgatgcggctgatcttcctgcaaat
ctgggtttgccgcgtgagcgcgtcataagcatttgcaacatggacaaacacgaattggac
gattactttgtagctggtgaagtagaagaagaaccagaggatcaagataccgaactgctt
caatattttcagacgagagacgctgaggaaaaattgaattccttagatgctgtaaaatcc
aataggcatccaacagccccaacgcaggcagcgactacaacaccgcaggcggcaccaaac
acgccgacaactgtggcctcaacagtgccgcccttggtaacgaaatcgctgcaacagaca
gcaaaaagctttggcaggcagcagagcgcacaagcggtagccacagatggctatggctgt
gcaacacaagtatcaaatagcggcttcacggccgctgccggccagaggaaacaacaaacg
gcgataattggctctccagtgtcaaaaccatgccccacaatgaaaaccatggctgttgga
tcggcctcagcgtctctaaccataatgtcccagaagcatcaacaacaacatcagcagcaa
caactgcattctcaaaacagcaaaagcgttatgcaacaagcgcttacaacaaaaacccat
aacaacagcaacagccacaaacgaaaaatcagcttaagtggcacaacgctgaacgctgcc
gaagtaatggcgtcgcgtaaaaattgcatattcttccccatatcacccaatagcaacacg
ggaagtagcggcagcaataccaacaaatccatcgtcagcagcgcaaataatcccaaattc
aatggaagcagcgttacgctgtatccggcgagtacgctcaattcgagcaatggcagtggc
aacagcgggggcagtaacgcgtgttcgtttttcgtcagccctggacagagcgcgcatcgg
gtgcgtcccaaaccagcgtttgcgctgggcaagcagcattcactggacaacgattccagc
gatcctatgatcggcgccagccgccgacggcggagttacgccaaccttgtcatgtctggc
ggcaataattcgcttatgccgcccacatctgcttcggcaccaccaagcccctcagttttg
cagcagcaacaacagcagcagcaattctatggcacgcccttctgtagcggcgacatgggc
cagcattctaacagccgttcgtcaaatgttcaaatgaatagtaacatagcggtgaatgca
actgatctattggcagccgagcaaaattcacttgacttggatatgttcagcgccgcggcg
gccagagctatggactatggtgagctggcattggatgagcttactacgcccctcaatgaa
atgcaacgctcgcagtcggtgccactttcccaactacagcgcatacactcaccggccttt
agtcgtagttttcaagctgcaccttattcagcgtgcacatccgtggcgcaaacaccagta
ccacacgaattcgccgactcattgacgcttttttctgagaacagttgcagccaaaatagc
ggtggagctggcgctaacataaccggcaaaaataacgcccaaacaacggctgtcaaattg
ttggatgaggaagccgccttattggcgaccgatacagccgcaatgctggataacctggac
gttgccgaaatgttcccagcagattttttgcgcatgaagtttccaagcaacgtacagggc
aatgccaccacaacgacctgctcatcagcgggctcctcgtcgggttacagcagcagcgcg
tgcacagcttttggcagcgccgcgctaatatcaggtggcggagttggtggtacgtgtttg
ctcagcagtaccggtaactcaatgtcccgctcggtgccttccactccgctgccacatcag
cagcagagcccattcgcttcgtacttttatggtagccgacgacgtttcgaggaggaggca
catctatcaccctcgcttacaacatcgggtaacaccatgggaggcacgttcactacaact
gtcttcaaatatggcaacaacggcagtggttcaataggtggcgccaacaacaactatgac
atgtcacgctccatgccaacgacgccgacggcaacaccgcgctttcgatacagtccaacc
gagtttacacgcgaatttcttagcaatggcaatacaaatacaatcgatagcctcatcagt
ggcggtgccaacactggcagtctgaccgatgctggtgcacctagcgaaggactaagcgct
gcgctcaccggcctcagtggtaacaatgatgcgcttattgatgacagttgtggcctgtcc
gctgatgcgttcgtcgtcaacaacactgtcaccgacgctgagtcaatgatggctgaggcg
aatgagctgctgggaaatttgtag
DBGET
integrated database retrieval system
