Rhagoletis zephyria (snowberry fruit fly): 108361834
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Entry
108361834 CDS
T08513
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rze03400
]
108361834
Enzymes [BR:
rze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108361834
DNA repair and recombination proteins [BR:
rze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
108361834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
Glyco_trans_4_5
Motif
Other DBs
NCBI-GeneID:
108361834
NCBI-ProteinID:
XP_017470084
LinkDB
All DBs
Position
Unknown
AA seq
2172 aa
AA seq
DB search
MKQFPRFSTALRANTDLEAKLPQPGAAQKDLRKLQEEEIAERQTLAQVLEQLPPEKQPQA
KVHLQKLRNLVQECMGYEEQPQVVEHAALFMFWLLLEQRVVTVASKMRVRGMFGSIFETK
LTKIHQCISEIRQLLEDFQLEALKHWNRKTNRDALDKKSWGTNIRVRLKGPPLGDLQQLQ
DLAPNAQLQKNAAINFSMQWNKDAEQQRNGENESELSQLLELSVTSGDPKLVTKVSEQLS
SKCSNNELQNELIELLGFDRFDLVEQLLEQRATIAAQLEQHEKREQRLQLTKLAQQQRIT
GNNEMRPTVTKTVVVQSALEKELTKQNRRDGKKIQRMLQSMNRNNDDDDEAVARAFNPTQ
LRLQQQRKLLENVQQQPVLKTTQRLQEMRAAASYHSNTIQYPYVFDSQLTAKQHAGFIGG
NRISLPDHAERKDNKQYEEVKIPANEPPPLSIGNNRIQISDLDEIGKMAFENCTELNRIQ
SVVYPVAYHSNENMLVCAPTGAGKTNVAMLTMVHTIRAHLEGGIINRDQFKIVYIAPMKA
LAAEMVENFGKRLKSLNIVVRELTGDMQLSKTEMTQTQVLVTTPEKWDVVTRKGAGDVAL
ISLVKLLIIDEVHLLHGERGPVVEAVVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFL
RVNPMKGLFYFDSRFRPVPLDTNFIGVKAVKPLQQLSDMDQICYQKCLEMVKDGHQVMVF
VHARNATVRTATTLRELAQQNQTTPFFLPNEATNSFSLAQRAIQKSRNKQLVELFACGLG
IHHAGMLRSDRQMVEKYFGEGHIKVLVCTATLAWGVNLPAHAVIIKGTDIYDSKHGSFID
LGILDVLQIFGRAGRPQFDNKGVGTIITTYDKLNHYLSLLTNQFPIESNFIQCLADNLNA
EITLGTISNVEEAIEWLSYTYLFVRMRINPHVYGIEYSDQQKDPTLEAKRRGLIMSAALS
LDKARMIRFNQRTMDFNITDLGRTASHFYIKYDTVEIFNDLLKPFMNEAEIFAMISQAQE
FQQLKVRDDELEELDELRTSYCRVKAAGGSENISGKVNILMQTFLSHGYVKSFSLISDMA
YIVQNIVRITRALFSIVLRNNNAILATRLLQICKMFERQQWDFETPLRQFSAINAETIDK
LERRGISLYTLREMEQNELKEILRNPRFADLVLRSAREVPMLDVEAMLQPITRTVLRIKI
DVWANFNWNDRVHGKVSELFWLWIEDPESNFIYHSEQFQATRKFVYGGKPQQLVMTIPLK
EPLPPQYYVRIASDNWLGSATWTALSFKHLVLPEHHPPLTELLPLHPLPVSSLKNPQYES
LYNFTHFNPIQTQIFHCLYHTDNNVLLGAPTGSGKTIVAEIGIFRAFNKHPRAKIVYIAP
LKALVKERINDWKRRFEGPPLRWKVVELTGDTTPDIQAIRESQVIVTTPEKWDGISRSWQ
TREYVQDVVLIVIDEIHLLGEDRGPVIEVIVSRTNFITSHTGRTIRIVGLSTALANAQDL
ANWLGIKKMGLYNFKPSVRPVPLQVHISGFSGKHYCPRMATMNRPTFQAIRTYSPCEPAI
VFVSSRRQTRLTALDLITFVAGDENPKQFLHLPENEMHQILQGIKDSNLKFCLAFGIGLH
HAGLQEQDRKTVEELFLNRKIQVLIATATLAWGVNLPAHLVVIKGTEYFDGKVKKYVDMP
ITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKNFYKKFLYDPFPVESSLLGVLSEHINAEI
VSGTVQTKQAALDYLTWTYFFRRLLRNPTYYNLDGLEPEQLNSFLSSLIERVIYELQSAA
CVLQRENLLIPTFLGRIASFYYLSHRTMKHFLDDLAEGMSTSEVLAAIADSYEFDQQPVR
HNEDKYNEELAESCRFRPPAPTWDSPYTKTFLLLQAHFSRLSLPNSDFLTDTKSALDNAT
RVMQAMVDYTAERGWLTTTLRLQQLMQCVIQARWFDESEFLTLPHVTAANVSVFYNIEHT
YAYLTLPALKELCRQDYERLAGPLRDVFEEQEIEQIYRVVQAVPEISVQISIQGKYYEAM
EAVRVLTTMPSTDNWTEIHPNEDYVLSVEMKRVNWNAREQRVHHGNPTAIHCPKYPKGKS
EAWFLTLGSQANSEVLAMKRVSVRGQRATNRICFQSTPRHGRVVLTLYLMSDCLIGVDQQ
FELQFDVVDAKA
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtttcctcgcttttcaacggcactacgtgcgaatacagatttggaagcgaaa
ttgcctcaacctggagcggctcaaaaggatttgcgaaaattgcaagaggaagaaatcgcg
gaacggcaaacattggcgcaggtacttgaacaactgcctcctgaaaagcaaccacaagcg
aaggtacatcttcagaagctacgcaatctagtgcaagaatgtatgggctacgaagaacag
ccacaggtagtggaacatgctgcactatttatgttttggctgctattggaacaacgagtg
gtgacagtggcatcgaaaatgcgtgtgcgtggtatgttcggcagtatcttcgaaacgaaa
ctcactaaaatacaccaatgcattagcgaaatacgtcagttgctggaagattttcaactt
gaggctttaaaacactggaatcgcaaaacaaatcgagatgcgctagacaaaaaaagttgg
ggcacaaatatacgcgtacgcttgaaagggccacccttgggcgacttacaacaactacaa
gatcttgcacctaacgctcaattacaaaaaaatgcagctattaatttttcaatgcaatgg
aacaaagatgccgaacaacagcgcaatggggagaacgagagtgaattgtcgcaactgcta
gagctgtcagtaacttccggtgatccgaaacttgtaaccaaagtaagcgagcagcttagc
tcgaaatgcagcaacaatgaattgcaaaatgagctcattgaacttctaggatttgatcgc
ttcgatttggtagagcagctactggaacaacgcgccacaattgctgcacaactggaacaa
catgaaaagcgtgaacaacgtttacaacttaccaaattagctcaacaacaacgaataact
ggcaacaacgaaatgaggccgacagttaccaaaaccgttgtggtgcaatcagcactggaa
aaagagcttactaagcaaaatcggcgcgacggtaagaagatacaacgtatgttgcaaagc
atgaatcgcaacaacgatgacgacgacgaagctgttgcacgcgcattcaatccaacgcaa
ctacgccttcaacaacaacgtaaactgctcgaaaatgtacaacaacaaccagtactaaaa
actacacaacgcttacaggaaatgcgtgcagccgctagctaccacagcaacacaatacaa
tatccatacgtatttgatagccaacttacagccaaacaacatgccgggtttataggtggc
aatcgcataagtttgccagaccatgccgagcgcaaagacaacaaacagtatgaagaagtg
aaaataccagcaaacgaaccgcctccacttagtattggaaataatcgtattcaaatttct
gatctcgatgaaatcggcaaaatggcattcgagaattgcacagaactcaatcgcatacaa
tcggtggtctatccggtggcatatcacagcaacgagaatatgttggtgtgcgctcccact
ggtgctggtaaaaccaatgtggctatgctaactatggtgcatacgatacgagcacatctc
gaaggaggtatcatcaatcgcgaccaattcaagattgtttatatagcgccgatgaaggct
ttggcagcagagatggttgagaattttggcaagcgtttaaaatctctgaatattgttgtg
agagaattgactggcgatatgcagctatcaaaaacagaaatgacacagacgcaggtgttg
gtcacaacgccggaaaagtgggatgtggtcactagaaagggtgctggcgatgtagcactc
attagtttagtgaagctgctcatcatcgacgaagtacatctgttacacggtgaacgcggt
cctgttgttgaggcggtagtcgcacgcactctgcgcctcgtagaatcttcacagagcatg
atacgtattgtcggactatcggctacattgcctaattacatcgatgtagcgcacttcctt
cgtgtcaatccaatgaaaggccttttttatttcgactctcgcttccggcccgtgccgttg
gatactaatttcattggcgttaaagcagtaaaaccgctccaacaactctccgatatggat
caaatttgctatcaaaaatgtttggaaatggttaaggatggacatcaggtcatggtattt
gtacatgcgcgaaatgctactgtgcgcacagcaacaaccctgcgagaattggcgcaacaa
aaccaaaccactcccttctttctacccaacgaagctacgaatagctttagtttggcacag
cgcgctatacaaaaaagccgcaacaaacagttggttgagctttttgcttgtggtctgggc
attcatcatgcgggcatgctgcgctccgaccgccagatggtcgaaaagtatttcggcgag
ggtcacatcaaagtgctagtctgtacggcgacactggcatggggtgttaatctacccgct
catgctgttattataaaagggactgatatttacgattcgaagcatggctcatttatagac
ctcggcattttggatgtactgcagatttttggtcgagctggtcgtcctcaatttgataac
aaaggtgttggcaccatcattaccacctacgataagttgaatcactatctgtcactgcta
accaatcaattcccaatcgaatcgaatttcatacagtgcctcgccgataatctaaatgcc
gagataacactaggcaccatatcgaatgtcgaagaggccattgaatggctgagttacacg
tatctctttgttcgaatgcgcatcaatccacatgtctatggcatcgaatacagcgatcaa
caaaaagatcccaccctggaggctaagcgtcggggtctcatcatgtctgccgctttgagc
ttggacaaggcgcgcatgattcgcttcaatcagcgcacaatggatttcaacattacagac
ttgggacgcacagcatcgcatttttatataaaatatgatacagtagagattttcaatgat
ctgcttaaaccttttatgaatgaagccgagattttcgcaatgatttcacaggcacaagaa
tttcaacaacttaaagtacgcgacgatgagttggaagagttagatgaattacgcacttcc
tactgcagagttaaagcggccggcggcagtgagaatatcagcggcaaggtcaatatcctc
atgcagacattcctctcacatggctatgtgaaatctttttcactcatctccgatatggcc
tacattgtccaaaatatagtacgtattacccgcgcactcttctccattgtgctgcgcaac
aacaacgccatactggccacacgacttttgcagatatgcaaaatgttcgagcgacagcaa
tgggatttcgagacgccgctacgccaattttctgccatcaacgctgaaactattgacaag
cttgagaggcgcggcatcagcctatatacgttacgtgaaatggaacaaaatgaattgaag
gagatattgcgcaatccgcgtttcgctgatttggtgcttcgttcggcgcgcgaggtaccc
atgcttgatgtcgaagcaatgctgcaaccaataacgcgcacggtactgcgcataaaaatt
gacgtctgggccaatttcaattggaacgatcgtgtgcatgggaaagtcagtgagctattt
tggttgtggattgaagatccagaatcgaatttcatctatcactccgagcaatttcaggca
acacgcaagtttgtttatggcggcaagccgcaacaactcgtaatgaccataccacttaaa
gaaccattgccaccgcaatattatgtacgcattgcaagtgataattggctcgggagcgcc
acatggactgccctctcatttaaacatctcgtgttgcccgagcaccatccgccactcacc
gagttactgccattacatcccttgccagtctcaagtttgaaaaatccgcaatacgaatcg
ctatataatttcacacacttcaatccgattcagacacaaatctttcattgtctgtatcat
accgacaataatgtgctactgggcgcacccacgggctctggtaaaactattgtcgctgaa
attggcattttccgtgctttcaacaagcatccacgcgcgaaaattgtatatattgcccca
cttaaggcgttggttaaagagcgtataaacgattggaagcgtcgttttgagggcccacct
ctgcgttggaaagtggtggagctgaccggtgacacaacgcctgatatacaggccatacgt
gagagtcaagttattgtgacaacaccggagaaatgggatggtataagtcgttcgtggcag
acacgtgaatatgtgcaggatgtggttttgattgtgatcgatgagatacatttgctgggc
gaagatcgtgggccggtcattgaagtgattgtctcgcgtacgaattttatcacttcgcat
acggggcgtaccatacgcattgtcggcttgtcaacggcattggccaatgcgcaagatttg
gcaaattggctgggcatcaaaaagatgggtctgtacaactttaagccatctgtgcgtcct
gtgccactacaggtgcatataagtggattttccggcaaacactactgtccacgcatggcc
accatgaatcgtcccacattccaagctattcgcacttactcaccctgcgagccggccatc
gttttcgtatcgtcacgccgtcagacgcggctgaccgcactcgatttgatcacttttgtc
gcgggtgacgagaaccctaagcaattccttcatttgcccgagaacgaaatgcatcagata
ctgcaaggaatcaaggattctaacttgaaattctgtcttgcatttggcattggtctccat
cacgctggtctacaggaacaggatcgcaagactgtcgaagagctatttctcaatcgcaaa
atacaagtactgatcgccactgccacactggcttggggcgttaatttgccggcgcatttg
gtcgtcattaaaggcactgaatatttcgatggcaaggtaaaaaaatatgtggacatgccg
ataaccgacgtgctacagatgatgggtcgtgccggtcggccacaattcgataacgaaggt
gttgctgtagtgctggtgcacgatgaaaagaaaaatttctataagaaattcttatatgat
ccattccccgttgagtcaagcttgttgggcgtgttgtcggagcatataaatgcggagatc
gtttcaggcactgtacaaaccaaacaagctgcactggactacctaacgtggacttatttt
ttccgacgcctgctacgtaatccaacctactacaacttggacggcttggaaccggagcag
ctgaattcgttcctttcatcgttaattgaacgcgttatttatgaattgcaatcggcagct
tgcgttctgcaacgcgaaaacttgctgataccgacattcctcggccgtatagcgtccttc
tattacttatcgcatcgcacaatgaaacactttctggacgatttggccgagggtatgagc
acaagtgaagtactggcggccattgccgactcgtatgaatttgatcagcagccggtgcgt
cacaacgaggataaatacaacgaggaacttgctgaatcgtgccgcttccgtccacctgct
cccacctgggactcaccctacacaaagacatttctgctgttgcaagcgcatttttcgcgc
ctctcactgccaaattccgattttctaacggacaccaaatctgcgttggacaatgccacg
cgtgtcatgcaagccatggttgattataccgccgaacgtggctggctcaccaccacgcta
cgactccagcagctaatgcaatgcgttatacaggcgcgttggtttgatgaatcggaattt
ttgacactaccacatgtgaccgccgccaatgtgtctgtcttctataacatagaacacacg
tatgcttacctaactctgccggcgctcaaagaactgtgcaggcaggattacgaacgtcta
gctgggccgctaagagatgtgtttgaagagcaggaaatcgagcaaatctatcgggtggtg
caagctgtgcctgaaattagcgtgcaaatctctatacaaggtaagtattatgaggctatg
gaagctgtgcgtgtgctaactacaatgccatcgacggacaactggacggagatacatcca
aatgaggattatgtactcagcgttgaaatgaaacgcgtaaattggaatgcgcgtgagcag
cgtgtacatcacggtaatcccactgctatacactgtccgaaatacccgaagggaaagagt
gaagcctggttcctaaccctgggttcccaagccaatagcgaggtgctcgccatgaagcgt
gtaagtgtgcgtggtcagcgtgccaccaatcgtatttgcttccaatccacaccacggcat
ggacgtgtggtactaacgctgtaccttatgtccgactgcctaattggcgttgatcaacaa
tttgaactgcaattcgatgtagttgacgcgaaagcttaa
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integrated database retrieval system
